Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02377 ATGGCCGAAACTCGAGACGCCGCCGCCGATGGGGTGCCCGGAACTCCCGCCATAAGGGAAATGAGACCCGAGACCGCGACCCATGCGGGAATCGGGTCGGGTGGGATTCGGAGGGTGAATTTCCGAGCGGAGATTGATACGTCACCGCCGTTTGGGTCGGTGAAAGAGGCCGTGACCCGTTTTGGAGGTAGCGGGCCTTGGATACCGTTTTTTAACAACATTgaagattttgacctaaagaaagtggaggaacaagcagcagagttggagaaggatttgattgtcaaggaacttgaaacgcttgacTGCAATAGAATGGCCGAGACAAGAAGACCTGAACCTTCAAAGCCCTTGAATGTGTATGAAGAATATGGATTTAGTGTTaagactgctgagatgaggtggcttgcggctaaaaagatggaagaagctgcaagggctgcagaagctattgctcttgctgaaatcaaggctctatctaataatgctgagagatcttcaggattagttctgccagaaccggagaaagtcacttttgcttttggagagtgctctcccctaaacctcaaggctcagatacccgaggaatcaaccttgaagaaggtaatagattccaactttcaagttgatgaaacaaaaatttccaaactgactattctgaagaagttggaggaagcagctgaagaagttCTACACAGCAAACAAGTCTTGACAGATGCTTTAAACAGAGTTGAAACCGCAAACAGAAAGCAGCATGCTGCTAAGGAGGCTCTAAGGAGATGGATTCCTGAGGATGATATGAAGGAGTATAATAACACTATTAACTGCAACAAGTTTCATCAAGCTGGAATTTATCAAGATTCTCTGCAGGATGTAACCAGGTCAACAACATCAAACAATGATCCAAAGCCTGCTTTAAGGACCACAATTTCAATGAGAGATGTACTTAGCAGAAAGCAGGTTCCTGAAGGATATGCTACAAGAAAGGAGATGGAAGAGCACACTGAACGACAAAAGCTGGCTTTAATGGAGCTAGTAGATTATGTTGCTCTGGTTGGATGCATTAGAGTGATGAGGAATTTATCCACAGGGCTCTCCATGCCTATCACCTATGTCTGGGACTTCACTCTTTTGACTGTTTTCTACATGACAAATTACTGGgCCAATTCTAGAGCTGGGCATTTGGGCTCTGGTCCATGGACAACTTGCTTAACCTACAGCCCGCATGGGCTATGGGCTTTTTAG 1245 0.3213 MAETRDAAADGVPGTPAIREMRPETATHAGIGSGGIRRVNFRAEIDTSPPFGSVKEAVTRFGGSGPWIPFFNNIEDFDLKKVEEQAAELEKDLIVKELETLDCNRMAETRRPEPSKPLNVYEEYGFSVKTAEMRWLAAKKMEEAARAAEAIALAEIKALSNNAERSSGLVLPEPEKVTFAFGECSPLNLKAQIPEESTLKKVIDSNFQVDETKISKLTILKKLEEAAEEVLHSKQVLTDALNRVETANRKQHAAKEALRRWIPEDDMKEYNNTINCNKFHQAGIYQDSLQDVTRSTTSNNDPKPALRTTISMRDVLSRKQVPEGYATRKEMEEHTERQKLALMELVDYVALVGCIRVMRNLSTGLSMPITYVWDFTLLTVFYMTNYWANSRAGHLGSGPWTTCLTYSPHGLWAF 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02377 414 PANTHER WEB FAMILY PLANT PROTEIN 103 346 - -
Gma11g02377 414 PANTHER WEB FAMILY PLANT PROTEIN 3 102 - -
Gma11g02377 414 Coils Coil 220 240 - -
Gma11g02377 414 MobiDBLite consensus disorder prediction 1 20 - -
Gma11g02377 414 Coils Coil 72 99 - -
Gma11g02377 414 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 103 346 - -
Gma11g02377 414 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 3 102 - -
Gma11g02377 414 Pfam Weak chloroplast movement under blue light 81 265 IPR008545 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02377 Gma-Chr11 39142382 39148263 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02377 - - gmx:100818214 427.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g02377 11 39142382 39148263 Gma11g02377 11 39142382 39148263 ECH
Gma18g00196 18 1591374 1594119 Gma11g02377 11 39142382 39148263 GST
Gma11g02377 11 39142382 39148263 Gma14g00447 14 4303603 4305641 PCT
Gma14g00447 14 4303603 4305641 Gma11g02377 11 39142382 39148263 PCT