Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02339 ATGGTTCACTCCACTTCTCTTCTTCCCCATAATAACCAAACCTTCATCCTCTCCTTCCGCTCCAAACCTTCTTTTTTTCATTCCCATTCCCACTCTCTCTCTCTTCCATCTTCTTCCTCTTCTTCTCAATCGTCATGTTGCCACGTGGCTCGAATCTCCACCGAGACCTTGGAAGTCTCGCCGCCGCCGCCGCCGCCTCCGGGTTTCAACTTCCGCCGCGAAATCGCGCGCCTCGCTTCGCTCCGCGACAGGCTCGCCGCGTGCACTACTTTAAACGAGAAGCTCCGAGTGATGGACGCCGACTCCAGAGTGAAGCGCTTCTTCCGTTCCCGCCACGGGCTCGCTAGGGTTTTGGCGTCGCTGCAATTGAGCTCCGACCAACTTTTCCTGCTCAAGTGTGTGGTCGCGGCGGGGCAGGAGCACGTGCTGTGTTTGGGCGAAACGGAATCGTTGGAATCCTCCGCCTCCGCCGCCGCCGCCACCATGAGTGCGGTGAAGAGCGCGCTTTACGCTCTGGCGGAGATGATTGAGAATATGGATTCCTTTAACGGCAATGGCGGAGCGGGTTTGGGGATGGCGTTGGGGGATCACGAGATTGCGGAGCTGACCATGTTTTTACAGACTTTGGCGGAAATTGAGCGATTCTATGACTGTATTGGAGGAATTATTGGATATCAGATTACAGTACTGGAACTTGCACAAAAATCGTTTGAGATGCAGAATATAAGCTGGGCCCACCAGAGGCATGACGTGAAAGAATGCCAAATTTTGGGAATTAATGCACCTAATGGGCTTAACCTTTCTGAAGACACAGAGTATGCATCTCAAGCAGCTCTATGGGGTATAGAGGGTTTGCCAGACCTAGGTGAAATTTATCCTTTGGGAGGTTCTGCCGACAGACTTGGTTTGGTTGATCCTAACACAGGTGAATGCCTGCCTGCTGCAATGCTACCATATTGTGGAAGGACTTTGTTGGAAGGCCTTATAAGAGATCTTCAGGCTAGGGAATTCTTGTACTTCAAGTTATATGGGAAACAATGCATCACACCTGTTGCAATAATGACAAGTTCTGCAAAGAACAACCACAAACATGTCACCTCTCTGTGTGAAAGACTTTCATGGTTTGGAAGAGGTCGATCGACTTTCCAATTTTTTGAGCAGCCTCTTGTTCCAGTTGTTGGTGCAGAAGAATGCCAGTGGCTAGTCACCAAACCATTCAGTCCCTTGAGCAAGCCTGGAGGTCATGGTGTCATATGGAAACTTGCTTATGACAAAGGCATCTTCAAATGGTTTTATTGTCAAGGAAGAAAAGGTGCAACTGTGCGCCAAGTCAGTAACGTGGTGGCAGCTACAGATTTAACCCTCCTAGCCTTAGCAGGGATTGGTTTACGTCAAGGAAAGAAACTGGGATTTGCATCTTGTAAGCGGATCTCAGGTGCCACAGAAGGAGTTAATGTGCTGATGGAGAAGAAAAGTCTTGATGGGAACTGGGAATATGGTGTGTCTTGTATTGAATACACAGAGTTTGACAAGTTTGGAATTACTACCGGACCTCTTGCTCCAAAAGGTTTGCAGGCAGAGTTCCCTGCCAATACGAACATCTTATACATTGATTTGCCTTCTGCGGAGCTAGTTGGGTCAAGTAAGAGTGAAACTAGTTTACCTGGAATGGTGCTAAATACTAGAAAGCCAATAGTTTACACAGATCAGTTTGGAAGACATCATAGTGTCTCTGGTGGTAGACTTGAGTGCACAATGCAAAATATAGCTGACAATTATTCCAACTCATATTCTTCTAGATGTTATAATGATGTGGAAGCAGATAAGCTGGATACTTTTATTGTATACAATGAAAGAAGAAGGGTTACCTCCTCTGCTAAGAAAAAAAGAAGACATGGAGACAAGTCTTTACACCAGACACCTGATGGTGCTCTGTTGGATATCTTACGAAATGCTCATGATCTTCTTTCACAATGTGATATAAGACTTCCTGAGATTGAAGCTAACGAGAACTATGCTGATTCAGGACCACCATTTCTCATCCTTGTGCATCCGGCTCTTGGTCCTCTTTGGGAAGTCACTAAGCAAAAATTTTATGGCGGTTCCATATCAGAGGGCTCTGAGTTACAAATAGAGGTTGCAGAGTTTTTTTGGAGGAATGTTCAGCTCAATGGAAGCCTGATTATAATAGCTGAGAATGTTATGGGCTCAATGAAGATTAATGAGAACAGTGAATCCATACTACATTATGGCCAAAGGTGTGGAAGATGTAAATTGCAAAATGTCAAGGTATTGAACAAGGGAATTGATTGGACTTGCGATGAAAACATATACTGGAAACATGATGTGCAGCGATCTGAGGTGCTGCAGATCATACTGCATGGAAATGCTGAATTTGAGGCTACTGATGTTGTCTTACAGGGAAATCATGTGTTCGAAGTTCCAGATGGCTACAAACTGAAAATCATGCCAGGAAGCTCAGGTTTAGCAATCCAGTTGGATCCAATTGATCAAGATATGATGGAGAGTGGAAGCTGGCACTGGGATTACAAGATAGAAGGTTCTCACATTCAGCTAGAATTAGTAGAATCATAA 2595 0.4551 MVHSTSLLPHNNQTFILSFRSKPSFFHSHSHSLSLPSSSSSSQSSCCHVARISTETLEVSPPPPPPPGFNFRREIARLASLRDRLAACTTLNEKLRVMDADSRVKRFFRSRHGLARVLASLQLSSDQLFLLKCVVAAGQEHVLCLGETESLESSASAAAATMSAVKSALYALAEMIENMDSFNGNGGAGLGMALGDHEIAELTMFLQTLAEIERFYDCIGGIIGYQITVLELAQKSFEMQNISWAHQRHDVKECQILGINAPNGLNLSEDTEYASQAALWGIEGLPDLGEIYPLGGSADRLGLVDPNTGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHKHVTSLCERLSWFGRGRSTFQFFEQPLVPVVGAEECQWLVTKPFSPLSKPGGHGVIWKLAYDKGIFKWFYCQGRKGATVRQVSNVVAATDLTLLALAGIGLRQGKKLGFASCKRISGATEGVNVLMEKKSLDGNWEYGVSCIEYTEFDKFGITTGPLAPKGLQAEFPANTNILYIDLPSAELVGSSKSETSLPGMVLNTRKPIVYTDQFGRHHSVSGGRLECTMQNIADNYSNSYSSRCYNDVEADKLDTFIVYNERRRVTSSAKKKRRHGDKSLHQTPDGALLDILRNAHDLLSQCDIRLPEIEANENYADSGPPFLILVHPALGPLWEVTKQKFYGGSISEGSELQIEVAEFFWRNVQLNGSLIIIAENVMGSMKINENSESILHYGQRCGRCKLQNVKVLNKGIDWTCDENIYWKHDVQRSEVLQIILHGNAEFEATDVVLQGNHVFEVPDGYKLKIMPGSSGLAIQLDPIDQDMMESGSWHWDYKIEGSHIQLELVES 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02339 864 SUPERFAMILY Nucleotide-diphospho-sugar transferases 128 734 IPR029044 -
Gma11g02339 864 PANTHER UTP--GLUCOSE-1-PHOSPHATE URIDYLYLTRANSFERASE 3, CHLOROPLASTIC 25 858 - -
Gma11g02339 864 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 192 656 IPR029044 -
Gma11g02339 864 PANTHER UDP- GLUCOSE PYROPHOSPHORYLASE 25 858 IPR039741 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02339 Gma-Chr11 38817906 38825752 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02339 K22920 - gmx:100804343 1633.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g02339 11 38817906 38825752 Gma11g02339 11 38817906 38825752 ECH