Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02332 ATGTTAAAAAACCAACCACAACCAGATTGGCCTGAGCCCATTGTCCGGGTTCAGTCCTTATCCGAAAACTGCGAAGATTCAATCCCTGAAAGGTACATCAAGCCTTCTACTGATAGACCATCCATAAAAAGTTGTAATTTTGATGATGCCAATATTCCAATCATCGACCTTGGGGGACTATTTGGTGCTGACCAACATGTCTCAGCCTCAATTCTTAAGCAAATCTCAGATGCTTGCAAAGAATGGGGCTTCTTCCAAGTCACTAATCATGGTGTCAACCCTGATTTGATGGACAAGGTCAGGGAAACTTGGCGTGAATTCTTTCACATGCCCATGGAGGTGAAGCAGCAATATGCAAACTCGCCAAAAACCTATGAAGGCTACGGAAGCAGACTTGGAATTGAGAAAGGTGCTATTCTTGATTGGAGTGATTACTACTTTCTTCACTATCTTCCCTTTTCACTCAAGGACTATAACAAATGGCCCGCCTCGCCTCCCTCTTGCAGGGAAGTGCTTGATGGGTATGGGAGAGAGTTAGTGAGGCTATGTGGGAGGTTGATGAAGGCTTTCTCAATAAACCTTGGATTAGATGAAAAAATCCTTCAAAATGATTTTGGAGGGGAAGACATAGGGGCATGTCTAAGAGTGAATTTTTACCCTAAATGTCCACGGCCAGAGTTGACGTTGGGTTTGTCATCACACTCAGACCCTGGAGGAATGACTATGTTGCTTCCAGATGATCAAGTTCCTGGTCTTCAAGTTCGAAAATGTGATGATTGGGTTACTGTGAAGCCTGCAAAACATGCTTTCATTGTCAATATCGGAGACCAAATCCAGGTTCTAAGCAATGCAATTTACAAGAGTGTGGAGCACAGAGTGATAGTAAATTCAGATAAAGAGAGAGTCTCTCTTGCATTTTTCTACAACCCCAAAAGTGACATACCCATAGAACCAATAAAAGAGCTTGTAACACCGAAAAGGCCCTCACTCTACCCAGCAATGACCTTCGATGAATACAGACTCTTCATTAGAATGAGAGGACCTCGAGGCAAATCTCAAATTGAATCTTTAAAGTCTCCCAGATGA 1086 0.4291 MLKNQPQPDWPEPIVRVQSLSENCEDSIPERYIKPSTDRPSIKSCNFDDANIPIIDLGGLFGADQHVSASILKQISDACKEWGFFQVTNHGVNPDLMDKVRETWREFFHMPMEVKQQYANSPKTYEGYGSRLGIEKGAILDWSDYYFLHYLPFSLKDYNKWPASPPSCREVLDGYGRELVRLCGRLMKAFSINLGLDEKILQNDFGGEDIGACLRVNFYPKCPRPELTLGLSSHSDPGGMTMLLPDDQVPGLQVRKCDDWVTVKPAKHAFIVNIGDQIQVLSNAIYKSVEHRVIVNSDKERVSLAFFYNPKSDIPIEPIKELVTPKRPSLYPAMTFDEYRLFIRMRGPRGKSQIESLKSPR 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02332 361 Pfam 2OG-Fe(II) oxygenase superfamily 212 310 IPR044861 -
Gma11g02332 361 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 209 310 IPR005123 -
Gma11g02332 361 Gene3D - 12 344 IPR027443 -
Gma11g02332 361 PANTHER LEUCOANTHOCYANIDIN DIOXYGENASE-LIKE PROTEIN 11 358 - -
Gma11g02332 361 Pfam non-haem dioxygenase in morphine synthesis N-terminal 52 163 IPR026992 -
Gma11g02332 361 PRINTS Isopenicillin N synthase signature 75 92 - -
Gma11g02332 361 PRINTS Isopenicillin N synthase signature 270 296 - -
Gma11g02332 361 SUPERFAMILY Clavaminate synthase-like 14 345 - -
Gma11g02332 361 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 11 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02332 Gma-Chr11 38715754 38718938 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02332 28 358 Glycosyltransferase AT5G59530 31.195 2.40e-43 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02332 - - gmx:100801693 753.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00245 18 1996258 2000321 Gma11g02332 11 38715754 38718938 ECH
Gma11g02332 11 38715754 38718938 Gma11g02332 11 38715754 38718938 ECH
Gma18g00245 18 1996258 2000321 Gma11g02332 11 38715754 38718938 GST