Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02256 ATGGAGTCCATGACGACCAGACTCTTCCTCTTCGCAGGGACTCTTCTACTGCTTCTACTCTCACGCGCCACGCACGTGTCATCCGCCACCTTATGTCCGCCGTGCGGCAACACGACGGTGCCGTTTCCCCTGAGCACAACCCCAACATGCGGCGACCCGTCGTACAAAATCCGATGCAGCAGCTCCAACACCCTCGTCTTCGACACGCTTAACAACTCCTACCCGATCGAGTCCATCGACCCGAACTCCCAGCGCTTCGTGATCCGACCCGCTCCGCTGTTAACGAACACGTGCGTGTCCACCGATAAAGTGCACCAGGGGATCCAGCTCAACACCACCCTCCCCTTCAACATCACAAGCTCCAACACCATCGTGTATCTCAACTGCACCACCACGCTCCTCCAGTCCCCGCTCAACTGCTCCGCCGCCAGCGCCTGCCATTCCTACATCAAGGCCACCGCCTCCGCCGCCGCATGCCAGGGCGCTGGGCCACTCTGCTGCACCTATCGCACCGGCGGCTCCAGCAACTCCTACATGCTTCGTGTTAGAGACTCTGGCTGTAGCGCATACTCTAGTTTCGTTAACCTCAACCCGGCTCTCCCAGTGAACCGCTGGCCCGAACCGGGTTTGGAGATTCAGTGGCTTTCGCCCAAAGAAACCGTGTGTGGGTCCCAGCAGGATTGCGACTCCGCCACGTCGACTTGCGGGCCTGATGCTTCTTCTGCGCTCGGGATCAGGAGGTGCTTTTGTAACGATGGGCTCGTCTGGGACCCTATCCAAGGGGTGTGCGCTAAAAAAATTACTTGCCAGAACCCTGGTGGTTGTGACGACTCAACAAGCAGAACGGCCATAATAGCAGGTTCAGTATGTGGGGTTGGAGCTGCACTCATTCTTGCCGTCATTGCCTTTCTACTCTACAAACGCCACAGGCGCATCAAAGAAGCACAAGCACGCCTAGCCAAAGAGCGTGAAGGGATTCTGAATGCCActcagaaggcaataGATTTTAACAGGGCTGCCGATGATGTGAACTTGGCGATTTACGTGCATCGGATGGTGGCTGAGGAAAAGTTGATGGATGTCATTGATCCAGTGTTGAAGAATGGAGCTACCACTATAGAGCTAGAGACGATGAAGGCAGTGGCGTTTTTGGCATTGGGTTGCTTGGAGGAAAAGAGACAGAATCGACCTTCAATGAAAGAGGTGGCAGAAGAGATTGAGTATATCATTAGTATTGCCTCGGCAAAGGTAGTGGAGAACTAG 1263 0.5463 MESMTTRLFLFAGTLLLLLLSRATHVSSATLCPPCGNTTVPFPLSTTPTCGDPSYKIRCSSSNTLVFDTLNNSYPIESIDPNSQRFVIRPAPLLTNTCVSTDKVHQGIQLNTTLPFNITSSNTIVYLNCTTTLLQSPLNCSAASACHSYIKATASAAACQGAGPLCCTYRTGGSSNSYMLRVRDSGCSAYSSFVNLNPALPVNRWPEPGLEIQWLSPKETVCGSQQDCDSATSTCGPDASSALGIRRCFCNDGLVWDPIQGVCAKKITCQNPGGCDDSTSRTAIIAGSVCGVGAALILAVIAFLLYKRHRRIKEAQARLAKEREGILNATQKAIDFNRAADDVNLAIYVHRMVAEEKLMDVIDPVLKNGATTIELETMKAVAFLALGCLEEKRQNRPSMKEVAEEIEYIISIASAKVVEN 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02256 420 CDD TM_EGFR-like 278 314 - -
Gma11g02256 420 Pfam Wall-associated receptor kinase galacturonan-binding 32 88 IPR025287 GO:0030247
Gma11g02256 420 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 21 329 IPR045274 GO:0007166
Gma11g02256 420 PANTHER OS05G0318100 PROTEIN 21 329 - -
Gma11g02256 420 Gene3D Transferase(Phosphotransferase) domain 1 328 418 - -
Gma11g02256 420 PANTHER OS05G0318100 PROTEIN 330 415 - -
Gma11g02256 420 Coils Coil 418 420 - -
Gma11g02256 420 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 330 415 IPR045274 GO:0007166
Gma11g02256 420 Coils Coil 312 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02256 Gma-Chr11 37891085 37893912 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02256 330 419 Receptor kinase-like Gene Family AT5G02070 53.333 8.88e-26 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02256 - - gmx:100305415 635.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g02256 11 37891085 37893912 Gma11g02256 11 37891085 37893912 ECH