Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02248 ATGGCAGGAAGCAGCATTAACAGAGGAGAAAGATGGTCTCTCAATGGAATGACTGCTCTTGTCACCGGCGGCACTCGTGGGATCGGGCACTCCATAGTGAGTGACTTGGCTGCGTTTGGCGCTGCAGTGCACACCTGTTCCAGGACCCAAACAGAGCTCAACAAATGCTTACAAGAGTGGCAGAGTCAGGGGTTTCAGGTAACTGGGTCGCTCTGTGACGTGTCCTCACCACCCCAGAGAGAGAAGCTCATTCAGGAAGTTGCATCCACCTTCAATGGCAAGCTTAACATCTACGTGAACAATGTTGGAATAAACATTAGAAAGCCAACCATTGAGTACACTGCTGAAGAATATTCACAGATTATGACAGTTAATTTAGACTCCTCATTCCATCTGTGCCAGCTTGCATATCCTCTTCTGAAAGCATCTGAAAAGGGAAGCATTGTGTTCATTTCATCTGTTGCTGGTGTAGTGAGTTTAGGTACTGGAGCTGTCTTTGCAGCAAGTAAAGCTGCAATTAATCAGCTTACAAAAAACCTGGCTTGTGACTGGGCCAAAGACAACATACGGAGCAACTGTGTTGTACCATGGGCAACCAGAACCCCGGTTGTAGAACATTTGTTCAAAGACCAAAAGTTTGTGGATGATATTATGTCTCGGACTCCAATTAAACGTATAGCAGAACCAGAAGAAGTGTCATCGTTGGTGAATTTTCTTTGCTTGCCTGCTGCTTCATTCATCACTGGACAGGTTATTTGTGTTGATGGAGGATTAACTGTGAATGGATTTCAACCCAGCATGAGAATTACCTGA 813 0.4526 MAGSSINRGERWSLNGMTALVTGGTRGIGHSIVSDLAAFGAAVHTCSRTQTELNKCLQEWQSQGFQVTGSLCDVSSPPQREKLIQEVASTFNGKLNIYVNNVGINIRKPTIEYTAEEYSQIMTVNLDSSFHLCQLAYPLLKASEKGSIVFISSVAGVVSLGTGAVFAASKAAINQLTKNLACDWAKDNIRSNCVVPWATRTPVVEHLFKDQKFVDDIMSRTPIKRIAEPEEVSSLVNFLCLPAASFITGQVICVDGGLTVNGFQPSMRIT 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02248 270 Gene3D - 7 262 - -
Gma11g02248 270 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 93 104 IPR002347 -
Gma11g02248 270 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 154 IPR002347 -
Gma11g02248 270 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 166 185 IPR002347 -
Gma11g02248 270 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 3 267 - -
Gma11g02248 270 Pfam Enoyl-(Acyl carrier protein) reductase 25 259 - -
Gma11g02248 270 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 16 261 IPR036291 -
Gma11g02248 270 PANTHER TROPINONE REDUCTASE 3 267 IPR045000 GO:0016491
Gma11g02248 270 PRINTS Glucose/ribitol dehydrogenase family signature 18 35 IPR002347 -
Gma11g02248 270 PRINTS Glucose/ribitol dehydrogenase family signature 93 104 IPR002347 -
Gma11g02248 270 PRINTS Glucose/ribitol dehydrogenase family signature 140 156 IPR002347 -
Gma11g02248 270 PRINTS Glucose/ribitol dehydrogenase family signature 166 185 IPR002347 -
Gma11g02248 270 PRINTS Glucose/ribitol dehydrogenase family signature 187 204 IPR002347 -
Gma11g02248 270 PRINTS Glucose/ribitol dehydrogenase family signature 222 242 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02248 Gma-Chr11 37796131 37799649 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02248 10 265 Miscellaneous Gene Families AT2G29290 60.465 3.40e-117 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02248 K08081 - gmx:100527615 539.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g02248 11 37796131 37799649 Gma11g02248 11 37796131 37799649 ECH
Gma18g00331 18 2775823 2778777 Gma11g02248 11 37796131 37799649 GST