Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02232 ATGGCTACTTCCTCACATTACTTCATTTTCTTCAGCATTCTGGTCTCCATCTCCCTCACAGATGGAACACAACTCATAATAGTAAACAATTGCAAAGAAAGTGTATGGCCAGGAATTCTCGGCAATGGAGGACACCCTTCACCTAAACATGGTGGATTCCACCTCGGTAGCGGCGAAGAGATTGTTATCCATGTCCCTAAGGTTTGGTCAGGGAGAATCTGGGGCAGACAAGGTTGTTGCTTCGACCAAAACACAGCCAAAGGTTCATGTCAAACAGGTGATTGTGGAGGCCTATTACAATGCAACGGAATTGGTGGAGTCCCTCCAGCTACACTAGTAGAAATGACCCTTGGAACCTCTCAATCACCATTGCATTTCTATGATGTTAGTTTGGTTGATGGGTTTAACCTTCCAGTGTCAGTGAAGCCTGTGGAAGGTGGTGGTGGTGGTGGTGCAGGTTGCGGCGTGGCGGCGTGTGAGGCAAACTTGAACGTTTATTGCCCTTCTTCTTTGGTTGTGGAGAGGAATGGGAAGGTTGTGGGGTGCAAGAGTGCTTGCTTGGCTGCAAAGTCAGATAGGTATTGCTGCACTGGTGAGTTTGCTGGTGGGAGATACTATTGCAAGCCAACTGTGTTTGCTCGTCTTTTCAAGACTGTTTGCCCTAATGCTTATAGCTATGCTTATGATGATGATTCGGCAGTGCTCAAGACTTGTGTGGCACCTCGCTATGTCATCACATTTTGCCCTCCACACTGA 756 0.4749 MATSSHYFIFFSILVSISLTDGTQLIIVNNCKESVWPGILGNGGHPSPKHGGFHLGSGEEIVIHVPKVWSGRIWGRQGCCFDQNTAKGSCQTGDCGGLLQCNGIGGVPPATLVEMTLGTSQSPLHFYDVSLVDGFNLPVSVKPVEGGGGGGAGCGVAACEANLNVYCPSSLVVERNGKVVGCKSACLAAKSDRYCCTGEFAGGRYYCKPTVFARLFKTVCPNAYSYAYDDDSAVLKTCVAPRYVITFCPPH 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02232 251 ProSiteProfiles Thaumatin family profile. 25 251 IPR001938 -
Gma11g02232 251 SUPERFAMILY Osmotin, thaumatin-like protein 24 250 IPR037176 -
Gma11g02232 251 PIRSF PR5 1 251 IPR001938 -
Gma11g02232 251 Gene3D Thaumatin 24 249 IPR037176 -
Gma11g02232 251 SMART tha2 25 249 IPR001938 -
Gma11g02232 251 PANTHER PATHOGENESIS-RELATED THAUMATIN FAMILY PROTEIN 2 251 - -
Gma11g02232 251 Pfam Thaumatin family 29 249 IPR001938 -
Gma11g02232 251 PRINTS Pathogenesis-related protein signature 24 36 IPR001938 -
Gma11g02232 251 PRINTS Pathogenesis-related protein signature 72 83 IPR001938 -
Gma11g02232 251 PRINTS Pathogenesis-related protein signature 125 141 IPR001938 -
Gma11g02232 251 PRINTS Pathogenesis-related protein signature 239 248 IPR001938 -
Gma11g02232 251 PANTHER OS03G0233200 PROTEIN 2 251 IPR001938 -
Gma11g02232 251 CDD TLP-PA 24 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02232 Gma-Chr11 37656410 37657679 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02232 5 249 Receptor kinase-like Gene Family AT5G38280 41.767 5.95e-50 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02232 - - gsj:114381056 523.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g02232 11 37656410 37657679 Gma11g02232 11 37656410 37657679 ECH