Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02207 ATGGGAGATCCAGCGGAAAGGTTGGGATCGGAAGGATTGGATTCCGGCGCCGCCGTCAAGACCGACGACCTGTGCATGGAAATCGATCCGCCGTTTCAGGAAAACGTTGCCACCGCCGAGGACTGGCGCAAAGCTCTTAACAGAGTCGTCCCCGCCGTCGTCGTCCTCCGCACCACCGCCACCCGCTCCTTCGACACTGAGTCCGCCGCCGCCAGCTACGCCACCGGTTTTGTCGTCGACAAGCGCCGCGGCATCATCCTCACCAATCGCCACGTCGTCAAGCCAGGTCCGGTGGTTGCAGAAGCGATGTTTCTGAACCGCGAAGAGGTTCCGGTGCATCCGATTTACAGAGATCCGGTACATGATTTTGGGTTCTTTTGTTATGATCCTGGCGCTATACAATTTCTGAACTATGAGGAGATACCTCTTGCTCCTGAAGCTGCCTGTGTAGGACTAGAAATCAGAGTTGTTGGTAATGATAGTGGTGAAAAGGTTTCCATTTTGGCTGGTACTCTTGCTCGATTGGATAGGGATGCTCCTCATTATAAGAAGGATGGGTATAATGACTTCAACACATTTTATATGCAAGCAGCATCTGGGACCAAAGGAGGGTCAAGTGGTTCCCCAGTTATAGATTGGCAAGGCAGGGCAGTGGCCCTCAATGCTGGGAGCAAGTCATCAAGTGCATCAGCATTCTTTCTACCTCTAGAACGAGTTGTGAGGGCATTAAGGTTTCTTCAAAAGGAAAGTGAAACTTATGTTGATAAATGGAAGGCAGTTTCTATACCTCGTGGTACGCTTCAGATGACATTTCTCCATAAAGGGTTTGATGAGACTCGTCGACTTGGCCTTAGAAGTGAGACAGAGCAGATAGTCCGTCATGCTTCTCCAGCTGGTGAAACTGGAATGCTTGTTGTGGACTCTGTGGTTCCAGGTGGTCCGGGTTATAAACATTTGGAACCGGGTGATGTACTTGTTCGTGTCAATGGAGAAGTCATTACTCAATTCCTGAAACTGGAGACTCTACTTGATGACAGTGTAAATAAGAATATTGAATTACAAATTGAAAGGGGTGGCACATCAAAAAGTTTAACTTTGTTGGTGCAAGATTTGCACTCAATAACGCCTGATTATTTCTTAGAAGTTAGTGGGGCAGTAATACATCCTCTTTCTTATCAGCAGGCTAGAAACTTCCGTTTCCATTGTGGGCTTGTTTATGTGGCCGAACCAGGATATATGCTCTTCAGAGCAGGAGTTCCTCGCCATGCAATAATTAAGAAATTTGCTGGTGAAGAAATATCATGTCTTGACGAACTGATATCAGTTCTTTCTAAGCTATCCAGGGGTGCTCGAGTACCATTGGAATATATAAGCTACATGGATCGTCATCGAAGGAAGTCTGTGTTAGTGACGGTTGATCGGCATGAATGGTATGCACCACCTCAGATATACACTCGTGATGACAGTACTGGTCTTTGGAATGCTAAGCCTGCTTTTAAGCTTGATTCCCCCTTCCTATCATTGGGTGCTAAAGATGTTGAAAATCTATCTAGACAGTCAGTTTCACTAACTGGTGAGCATGCTTGTGGGGGACATGTGTGTGGAGATAACAGTCAGGAGTTGGTTGATGGTGTCACTAGCATGGAAACCAATTGTGAAGATCCCTCAGAGTGTGTATCTCACCACAATGCATCTGATGGTGTGGTGAAAAAACGAAAAGTGGATGAAGATTTATCAGCTGATGGAAATGTTGTTGCTGATTTTTCCTTAAATGACTCAAGGGAAACTAAGCTAGAAAAATCAAGTATTATACAGGATGACATGTTAATGGACTATCAGGGTGCAACTGCAGCTACAGCAAATGCATCAGTTGCTGAACGTGTGATCGAGCCTACACTTGTGATGTTTGAGgttcatgttcccccatcttgtatgcttgatggtgttcattcacagcacttttttggaactggtgtcataatttatcattcccaagatatgggattagttgcagttgacaagaatacagttgcaatatctgcttctgatgtaatgctatctttcgccgccttcccagttgaaattccaggagaggtggtatttctccatcctgttcacaattatgcccttatatcatatgatccctctgcattgggacctgttgggggttcagttgttcgtgctgcagagttacttccagAGCCAGCATTACGCCGGGGGGATTCTGTTTATCTTGTGGGGTTGAGTAGAAGTCTGCAAGCAACTTCTAGGAAATCAGTTGTTACCAATCCTTGTGCTGCATTAAATATAGGATCTGCTGATTCCCCTCGCTATAGAGCAACCAATATGGAAGTAATTGAGCTTGATACAGATTTTGGCAGTACATTTTCGGGTGTGCTAACAGACGAACAAGGAAGGGTCCAAGCTATATGGGGAAGCTTCTCAACTCAGAAGAAGTACAAGAGAAGAAAGATGAAAACTAGAAAGAGACGAGAGAAGACAAATTTTACACAAACCTCAAAAGGCTACCTGATGCTGAAATTTGGTTGCAGCACCTCAGAAGATCATCAATTTGTGAGGGGTATTCCAATTTATGCAATAAGTCAGGTTCTTGACAAGATTATATCAGGTGCAAATGGGTCACCTCTTCTTATAAATGGTGTCGAAAGGCCTATGCCACTTGTGAGAATTCTAGAGGTTGAACTTTATCCAACATTGCTTTCAAAGGCTCGGAGTTTTGGATTAAGTGATGATTGGATTCAAGCACTTGTTAAGAAAGATCCAGTAAGACGTCAGGTTTTACGTGTTAAAGGTTGTTTGGCTGGATCAAAGGCTGAGAATCTTTTAGAACAAGGGGATATGGTTTTAGCAATCAACAAAGAACCAGTCACATGCTTCCGTGACATTGAAAATGCTTGCCAAGCTTTAGACAAATCCGACGCCAATGATGGGAAGCTTCACTTGACTATTTTCCGGCAGGGACAAGAGGTTGAACTTTTTGTGGGAACAGATGTTAGGGATGGAAATGGCACTGCTCGTGCAATTAATTGGTGTGGTTGTATTGTCCAAGATCCACATCCAGCAGTGCGTGCTCTTGGATTTCTTCCCGAAGAAGGTCATGGTGTATATGTGGCAAGGTGGTGCCATGGGAGTCCTGTACATAGGTATGGTCTATATGCTCTTCAGTGGATAGTCGAAATTAATGGAAAACCAACTCCAAATATAGATTCTTTCGTTAAAGTGACAAAGGAACTAGAACATGGCGAGTTTGTTCGTGTAAGGACAATTCACCTCAATGGGAAGCCACGAGTCCTAACATTGAAGCAAGATTTGCATTACTGGCCAACGTGGGAATTGAGATTTAATCCTAATAGTGCGATGTGGCATCGCAATATAATCAAGGGATTGAACTGCAGTTCTGTATGA 3426 0.4069 MGDPAERLGSEGLDSGAAVKTDDLCMEIDPPFQENVATAEDWRKALNRVVPAVVVLRTTATRSFDTESAAASYATGFVVDKRRGIILTNRHVVKPGPVVAEAMFLNREEVPVHPIYRDPVHDFGFFCYDPGAIQFLNYEEIPLAPEAACVGLEIRVVGNDSGEKVSILAGTLARLDRDAPHYKKDGYNDFNTFYMQAASGTKGGSSGSPVIDWQGRAVALNAGSKSSSASAFFLPLERVVRALRFLQKESETYVDKWKAVSIPRGTLQMTFLHKGFDETRRLGLRSETEQIVRHASPAGETGMLVVDSVVPGGPGYKHLEPGDVLVRVNGEVITQFLKLETLLDDSVNKNIELQIERGGTSKSLTLLVQDLHSITPDYFLEVSGAVIHPLSYQQARNFRFHCGLVYVAEPGYMLFRAGVPRHAIIKKFAGEEISCLDELISVLSKLSRGARVPLEYISYMDRHRRKSVLVTVDRHEWYAPPQIYTRDDSTGLWNAKPAFKLDSPFLSLGAKDVENLSRQSVSLTGEHACGGHVCGDNSQELVDGVTSMETNCEDPSECVSHHNASDGVVKKRKVDEDLSADGNVVADFSLNDSRETKLEKSSIIQDDMLMDYQGATAATANASVAERVIEPTLVMFEVHVPPSCMLDGVHSQHFFGTGVIIYHSQDMGLVAVDKNTVAISASDVMLSFAAFPVEIPGEVVFLHPVHNYALISYDPSALGPVGGSVVRAAELLPEPALRRGDSVYLVGLSRSLQATSRKSVVTNPCAALNIGSADSPRYRATNMEVIELDTDFGSTFSGVLTDEQGRVQAIWGSFSTQKKYKRRKMKTRKRREKTNFTQTSKGYLMLKFGCSTSEDHQFVRGIPIYAISQVLDKIISGANGSPLLINGVERPMPLVRILEVELYPTLLSKARSFGLSDDWIQALVKKDPVRRQVLRVKGCLAGSKAENLLEQGDMVLAINKEPVTCFRDIENACQALDKSDANDGKLHLTIFRQGQEVELFVGTDVRDGNGTARAINWCGCIVQDPHPAVRALGFLPEEGHGVYVARWCHGSPVHRYGLYALQWIVEINGKPTPNIDSFVKVTKELEHGEFVRVRTIHLNGKPRVLTLKQDLHYWPTWELRFNPNSAMWHRNIIKGLNCSSV 1141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02207 1141 Gene3D - 146 256 IPR043504 -
Gma11g02207 1141 SUPERFAMILY Trypsin-like serine proteases 632 818 IPR009003 -
Gma11g02207 1141 Pfam Trypsin-like peptidase domain 74 220 - -
Gma11g02207 1141 Gene3D - 29 132 IPR043504 -
Gma11g02207 1141 SUPERFAMILY PDZ domain-like 1039 1120 IPR036034 GO:0005515
Gma11g02207 1141 Gene3D - 933 1006 IPR036034 GO:0005515
Gma11g02207 1141 ProSiteProfiles PDZ domain profile. 269 333 IPR001478 GO:0005515
Gma11g02207 1141 CDD PDZ_metalloprotease 305 366 - -
Gma11g02207 1141 Pfam Peptidase family M50 254 374 IPR008915 GO:0004222|GO:0006508
Gma11g02207 1141 PANTHER PROTEASE DO-LIKE 7 21 822 - -
Gma11g02207 1141 PANTHER PROTEASE DO-LIKE 7 845 1136 - -
Gma11g02207 1141 Pfam PDZ-like domain 1012 1087 IPR025926 -
Gma11g02207 1141 Pfam PDZ-like domain 373 446 IPR025926 -
Gma11g02207 1141 Pfam PDZ domain 305 357 IPR041489 -
Gma11g02207 1141 Gene3D - 1014 1112 IPR036034 GO:0005515
Gma11g02207 1141 PANTHER PRO-APOPTOTIC SERINE PROTEASE NMA111 21 822 - -
Gma11g02207 1141 PANTHER PRO-APOPTOTIC SERINE PROTEASE NMA111 845 1136 - -
Gma11g02207 1141 SUPERFAMILY PDZ domain-like 304 403 IPR036034 GO:0005515
Gma11g02207 1141 SUPERFAMILY PDZ domain-like 935 1037 IPR036034 GO:0005515
Gma11g02207 1141 SUPERFAMILY Trypsin-like serine proteases 40 244 IPR009003 -
Gma11g02207 1141 SMART pdz_new 280 359 IPR001478 GO:0005515
Gma11g02207 1141 SMART pdz_new 1030 1099 IPR001478 GO:0005515
Gma11g02207 1141 SMART pdz_new 909 994 IPR001478 GO:0005515
Gma11g02207 1141 PRINTS HtrA/DegQ protease family signature 84 96 IPR001940 GO:0004252|GO:0006508
Gma11g02207 1141 PRINTS HtrA/DegQ protease family signature 150 174 IPR001940 GO:0004252|GO:0006508
Gma11g02207 1141 PRINTS HtrA/DegQ protease family signature 191 208 IPR001940 GO:0004252|GO:0006508
Gma11g02207 1141 PRINTS HtrA/DegQ protease family signature 213 230 IPR001940 GO:0004252|GO:0006508
Gma11g02207 1141 PRINTS HtrA/DegQ protease family signature 318 330 IPR001940 GO:0004252|GO:0006508
Gma11g02207 1141 Gene3D - 280 372 IPR036034 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02207 Gma-Chr11 37306941 37331184 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02207 K22686 - gmx:100809144 2209.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00366 18 3177197 3194512 Gma11g02207 11 37306941 37331184 GST