Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02181 ATGTCTCTGCTCTCAGATCTCATCAACCTTAACCTCTCCGATACCACCGAGAAGGTGATCGCAGAGTACATATGGATCGGTGGATCAGGAATGGACCTGAGGAGCAAAGCAAGGACTCTCCCAGGACCAGTTAGCGACCCTTCAGAGCTTCCCAAGTGGAACTATGATGGTTCCAGCACAGGTCAAGCTCCTGGTGAAGACAGTGAAGTGATTTTATACCCACAAGCCATTTTCAGGGATCCATTCAGAAGGGGTAACAATATCTTGGTTATCTGTGATGCCTACACTCCTGCTGGAGAACCTATTCCCACTAACAAGAGGCACGCTGCTGCCAAGGTTTTCAGCCATCCTGATGTTGTTGCTGAAGTGCCATGGTACGGTATTGAACAAGAATACACCTTGTTGCAGAAAGATATCCAATGGCCTCTTGGGTGGCCTGTTGGTGGTTTCCCTGGACCTCAGGGTCCATACTACTGTGGTGTTGGCGCTGACAAGGCTTTTGGCCGTGACATTGTTGACGCACACTACAAAGCCTGTATTTATGCTGGCATCAACATCAGTGGAATTAATGGAGAAGTGATGCCCGGTCAGTGGGAATTCCAAGTTGGACCTTCAGTTGGAATCTCAGCTGGTGATGAGATTTGGGCAGCTCGTTACATCTTGGAGAGGATCACTGAGATTGCTGGTGTGGTGGTTTCCTTTGACCCCAAGCCAATTAAGGGTGATTGGAATGGTGCTGGTGCTCACACAAACTACAGCACCAAGTCCATGAGAGAAGATGGTGGCTATGAAGTGATCAAAGCAGCAATTGACAAGTTGGGGAAGAAGCACAAGGAGCACATTGCTGCTTATGGAGAAGGCAACGAACGTCGTTTGACAGGACGCCACGAAACCGCTGACATCAACACCTTCTTATGGGGAGTTGCAAACCGTGGAGCTTCTGTTAGGGTTGGGAGAGACACAGAGAAAGCAGGGAAGGGATATTTTGAGGACAGAAGGCCAGCTTCCAACATGGACCCATACGTGGTTACTTCCATGATTGCAGACACAACCATTCTGTGGAAGCCATGA 1071 0.4902 MSLLSDLINLNLSDTTEKVIAEYIWIGGSGMDLRSKARTLPGPVSDPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFRDPFRRGNNILVICDAYTPAGEPIPTNKRHAAAKVFSHPDVVAEVPWYGIEQEYTLLQKDIQWPLGWPVGGFPGPQGPYYCGVGADKAFGRDIVDAHYKACIYAGINISGINGEVMPGQWEFQVGPSVGISAGDEIWAARYILERITEIAGVVVSFDPKPIKGDWNGAGAHTNYSTKSMREDGGYEVIKAAIDKLGKKHKEHIAAYGEGNERRLTGRHETADINTFLWGVANRGASVRVGRDTEKAGKGYFEDRRPASNMDPYVVTSMIADTTILWKP 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02181 356 Pfam Glutamine synthetase, catalytic domain 168 254 IPR008146 GO:0004356|GO:0006807
Gma11g02181 356 MobiDBLite consensus disorder prediction 37 66 - -
Gma11g02181 356 Pfam Glutamine synthetase, beta-Grasp domain 22 97 IPR008147 GO:0004356|GO:0006542|GO:0006807
Gma11g02181 356 PANTHER GLUTAMINE SYNTHETASE-LIKE 1 356 - -
Gma11g02181 356 SMART Gln_synt_C_2 103 351 IPR008146 GO:0004356|GO:0006807
Gma11g02181 356 ProSitePatterns Glutamine synthetase putative ATP-binding region signature. 237 253 IPR027303 -
Gma11g02181 356 ProSiteProfiles Glutamine synthetase (GS) beta-grasp domain profile. 19 99 IPR008147 GO:0004356|GO:0006542|GO:0006807
Gma11g02181 356 SUPERFAMILY Glutamine synthetase, N-terminal domain 15 102 IPR036651 GO:0004356|GO:0006542|GO:0006807
Gma11g02181 356 PANTHER GLUTAMINE SYNTHETASE 1 356 - -
Gma11g02181 356 SUPERFAMILY Glutamine synthetase/guanido kinase 103 351 IPR014746 GO:0003824
Gma11g02181 356 ProSitePatterns Glutamine synthetase signature 1. 55 72 IPR027302 -
Gma11g02181 356 ProSiteProfiles Glutamine synthetase (GS) catalytic domain profile. 106 356 IPR008146 GO:0004356|GO:0006807
Gma11g02181 356 Gene3D - 1 103 IPR036651 GO:0004356|GO:0006542|GO:0006807
Gma11g02181 356 Gene3D Glutamine synthetase/guanido kinase, catalytic domain 104 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02181 Gma-Chr11 36925236 36929599 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02181 K01915 - gmx:548082 739.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00388 18 3500655 3505140 Gma11g02181 11 36925236 36929599 GST
Gma11g02181 11 36925236 36929599 Gma14g02078 14 51912034 51915727 PCT
Gma11g02181 11 36925236 36929599 Gma02g02306 02 49121946 49123794 PCT
Gma14g02079 14 51919183 51922952 Gma11g02181 11 36925236 36929599 PCT
Gma02g02307 02 49127844 49131762 Gma11g02181 11 36925236 36929599 PCT