Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02180 ATGTCTCTGCGTGTGGCGGCAGCAAGTTTGCTAAAAAAACTTCGCTTTCCGGCTTCACATTTCTTTGCTGCGTCTACAGCAACCACAAATGCATTTTCCGGTAAACTCAAACTTTTCCGTTGGTATCAAACTGGTGCACATGGTTGTAGGATAGATCTCAGGGATCCTTGTCTATGGATTGTTATGTCTGGACATGTAGCAATGACTTTAGGAATTAGTGCCAGCACTGTATTTGCAGAAGATGCAACAACTGAAGCATCTTCTGATAATGACCCAGGGGGTGACTTAATCGGATTGAGAAAAATTGAGGATGACTCTGTAGTATCAAACATACATACAGCAAAATGGAGAGTCTTTACAGATAAAGCGAGACAATTTTTTCTTCAGGCATGCTATTTCTTCCTGTTTCTTTATGAAGCTGAAAAACTCTTCCTTTCTGCTATAGAAGAAGCTAAAGAAGGTTTTGGCGAGAAAGACCCGCATGTTGCTTCTGCATGCAACAATCTGGCAGAATTGTACAGGGTCAAAAAGGCATTTGACAAAGCAGAACCCTTGTATTTGGAAGCTATCAACATATTAGAGGAATCTTTTGGTCCTGATGATGTACGGGTTGGGGTTGCTGTTCACAACCTTGGGCAGTTCTACCTTGGACAGCGGAAGTTGGAAGAAGCTCGTGTTAGCTATGAGATAAAAAGGCGTGTTCTGGGGTATGGCCATTCAGAATGTTCAGATACAATGTATCATCTAGGAGTGGTACTGTATCTTCAAGGAAAAGAAAGGGATGCTGAGGCCCTTATTAAGGACTCTATAAGGATGCTAGAGGAAGGTGGTGAAGGAGAGTCTTTTGTATGCATTAGAAGACTACGATACCTTTCACAGATATATATGAAGTCACATCGAATTGCTGAAGCTGAAATGGTCCAGAGAAAGATCCTGCATGTTATGGAATTGTCAAAGGGATGGTATTTCTTGGACACTGTTATTGCAGCTGAATCTTTGGCTCTGACCCTGCAAGCATCTGGCAATACAAAAGATTCTAAAGAGCTTCTTGAAAGATGTCTTAATGTCCGGAAGGACTTACTTCCCAGTGACCATATTCAGATAGGTGCAAACTTACTTCATCTAGCAAGAGTGGCAATGCTTGATTGCAGTCAACATAAAAAGTTGGATGTTTCTAGAGCTAAAGCTGAGCTTGATATGGCAAAGAATCATTTGTATAATTCCATAAGGATTTCACGTCAATGTTTGGAGAAGGTATTGAAACAAAAGGACAAGTTAAAGAAATTCAGTAAGCCTGGAGATTCTAGAAAGGAAGGCCAAGTAGCACTGGCCATATTGTTGCAATCACTCTATACGTTGTCATCAGTGGAGTTAGATAAGCAAGAATTGCAGGAGATTCAGCAGGAAAGAGATAATATTAACATCGAGGCTCAGGAGGCACTTCTTCAATGCATTTCTACTTACAAGGAGTTTGTACATAAGAGGTCAATTGCTGATACCCCTGAAATAAAGAACGAACCAAACCAATCGTTCTCCATTGATTTGGTCAGAAGAATTCTGATCACATCGATCTTGTTGTGCACCACAAGGTTGGAGAATGATAAAGATATCTTGCACATGTGCCACATGGGTGGTGTGCCTGATAAGGTTGTGGTGAATCAAACTGAGGATGAAGTTCAAGATATTGATGTTGATCTTGACAAGGAAATTGAAAGGATTGTTAACCAAATTCAGAATCAAGATGAGATTGATTGTTCTCAATTTGCATCCACTGCAGAACAACCTCCAACAGTGTCAATGGTTGACTCTGGAGGTCAACCTAAGCCTATAACAGTGCAAACAAGTCTTCTACCACAATTGCAGGAACCAAATTTCGTGTCTGTTCAGCCAACACCTACATTTAGGCCTCTTCTAACTAGGCCTACTGCACCTATCAGGATACCATTCCTAGCTGGACCTTCACCAAGGATGATAAAACCTAACTTCATGAGCTTCATTCTCAGACCAGGGATGCCACAAAGGGAAAACAAGAAGAAGTGA 2040 0.4108 MSLRVAAASLLKKLRFPASHFFAASTATTNAFSGKLKLFRWYQTGAHGCRIDLRDPCLWIVMSGHVAMTLGISASTVFAEDATTEASSDNDPGGDLIGLRKIEDDSVVSNIHTAKWRVFTDKARQFFLQACYFFLFLYEAEKLFLSAIEEAKEGFGEKDPHVASACNNLAELYRVKKAFDKAEPLYLEAINILEESFGPDDVRVGVAVHNLGQFYLGQRKLEEARVSYEIKRRVLGYGHSECSDTMYHLGVVLYLQGKERDAEALIKDSIRMLEEGGEGESFVCIRRLRYLSQIYMKSHRIAEAEMVQRKILHVMELSKGWYFLDTVIAAESLALTLQASGNTKDSKELLERCLNVRKDLLPSDHIQIGANLLHLARVAMLDCSQHKKLDVSRAKAELDMAKNHLYNSIRISRQCLEKVLKQKDKLKKFSKPGDSRKEGQVALAILLQSLYTLSSVELDKQELQEIQQERDNINIEAQEALLQCISTYKEFVHKRSIADTPEIKNEPNQSFSIDLVRRILITSILLCTTRLENDKDILHMCHMGGVPDKVVVNQTEDEVQDIDVDLDKEIERIVNQIQNQDEIDCSQFASTAEQPPTVSMVDSGGQPKPITVQTSLLPQLQEPNFVSVQPTPTFRPLLTRPTAPIRIPFLAGPSPRMIKPNFMSFILRPGMPQRENKKK 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02180 679 SUPERFAMILY TPR-like 139 262 IPR011990 GO:0005515
Gma11g02180 679 SMART tpr_5 243 276 IPR019734 GO:0005515
Gma11g02180 679 SMART tpr_5 327 360 IPR019734 GO:0005515
Gma11g02180 679 SMART tpr_5 163 196 IPR019734 GO:0005515
Gma11g02180 679 Pfam Tetratricopeptide repeat 164 228 - -
Gma11g02180 679 Coils Coil 456 483 - -
Gma11g02180 679 Coils Coil 552 572 - -
Gma11g02180 679 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 2 533 - -
Gma11g02180 679 Pfam Tetratricopeptide repeat 331 366 - -
Gma11g02180 679 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 2 533 - -
Gma11g02180 679 Gene3D Tetratricopeptide repeat domain 137 281 IPR011990 GO:0005515
Gma11g02180 679 Gene3D Tetratricopeptide repeat domain 282 490 IPR011990 GO:0005515
Gma11g02180 679 SUPERFAMILY TPR-like 240 360 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02180 Gma-Chr11 36909318 36922836 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02180 - - gmx:100817145 931.398