Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02175 ATGGAGCTAACCGTTTTCTCTCTCTTCTTCTTCTTCTTCACCTTCCACCTTCCCTCCTGCTTCTCAGGACAATCGAGCTCCATGGAATCAGTGCCTGATCTTCAGAACACTATGTACGCTTCCATCGACGGTTATCCTTGCGTGCGCCTGATGAATCTCTCTGGCACCATCGGTTGTTCAAATCCTGGACGAGATAAGGTTGTGGCTCCAATTTTAAGGTTCGAAAATGTTGACAAAATAGCTGAGCCTTCTGCTATATTGGTTTCACTGGATGAGTTTCCAACTCTCTTTACTAGAATATCAGATGACTCTAGCTTTGCTAGTAAAGTCCTTGGTGTACTGGTTGAACCAACGGGTGATGTGCAGAATAAGTTAAAGGGATTTTCTCCGGACCAAAAGTTTCCACAAGCTCAATTCGCTCTTTATCATAATACCAGCTACCAATGGAATTCAATTGGTTCTGGTATTATGTGGAAATCCTACAAGTTTCCTGTATTTTTACTCACAGAAAGTGGCTCAAAGACTCTTCAAGAGTTTGTAACAAAGAATGAGGACAAAAAGAAATCTTATACTTCTAATGTGGCTGAGTTTGATCTGGTGATGCAGACAGTGAAATCTGGAACACATGATTCAGAGTCTTGTTTAAAAGAAGAAACTTGCCTTCCTTTAGGTGGATACAGTGTCTGGTCATCTCTTCCTCCGATCAACATTTCATCCTTACAACAGTCTAAGCCCATTTTATTGACAGTGGCATCTATGGATTCTGCTTCATTTTTTCGGGACAGAAGTCTTGGTGCAGACTCCCCTATTTCTGGTTTAATTGCATTACTAGCAGCTGTTGATGCACTTTCTCATTTGGATGGTCTTGGTGACCTTAGTAAACAGCTTGTTTTTGCAGTTTTCACTGGAGAGGCATGGGGTTACCTTGGAAGTAGGAGATTTTTGGTAGAACTTGACATGCACTCAGATGCTGTTCATGGCCTTAATCATACATTAATTGAAACGGTCATTGAAATTGGTTCTGTTGGAAAGGGTCTCAGTCAAGGTGTTAAAAACTTTTTTGCTCATAAAGAGGGGGATTCTTCTGCCACAAATCAGACAGTGGCTGCCTTGAAACGTGCACAGGAGTCACTGATATCTGAAAACATAAAGATAGCATCTGCAAGTGCCTCAAATCCTGGGATACCTCCATCCTCTTTGATGTCCTTTTTGGAAAAGAATCCTGCAATCTCTGGTGTTGCCCTAGAAGATTTTGACTCTGTCTTTGTCAACAAGTTCTACCATAGTCATCTTGATGATTTATCAAATGTAAATTCATCAGCTGTAGTTGCTGCTGCTTCTCTCATTGCCCGAACCCTTTACATGCTTGCCAGTGAAACTGAAGATGTACAAAATTCTACTTTGGCTGCTATAAATGTTAATGTCTCACTTGTTGAACAACTTATGGGTTGTTTGTTGGACTGTGATCCTGGTCTTTCTTGTGAATTGGTGACAAAATATATTTCACCCATGTCAACCTGTCCAAGCCATTACGTAGGTGTTATCTTGGACGAACCTTCATCTACACCATATACAGGATACATCAATGATGTTCCCAGGTTCATCTGGAATTTTCTGGCTGACAGAACTTCTATCCCAAGGGAGAATAATAGTTCAGATTGTCAACATGGTTGCAATGGTAGAGATGAAGTATGCATCAAAGCAGAGACTGATGGCAAGGGAGTTTGTGTTCTCTCTACAACGAGGTATGTTCCGGCTTATTCAACACGGCTAAAATTTGAATCAGGAGTGTGGAATGTTTTGCCCCCTAATTCCTCTGACAAAATGGGGGTTGTGGACCCTGTCTGGACAGAGAGCAACTGGAATACGATAGtagagggtgtcacCGGTCTCGAAGGCGACGAGGAGGTCGGGGTCAGCCTTAGAGTGGATGAGGGAGTCGTGGACCTGTGCACTGACGATGAAGCTCAAGCGGTTGGCGAGGATGTCAATTCGGCCAATGATTTTGAGGATGCCGAATTGGGAGGGAAGGGGCATCAGGGGAGGGCAGAAGGGCTGGTAGACTTGATGCTGCAGCGGCAGAGGCTGTTAGGGCTTCTTGAAGGAAAACGAGTTAAGGACGATGGAGATGGGTTTCACGAATGTAGTGAGGAGGGTGCAGGGGTTTGTGCGTGGAGGATGAGGTCGCCATCGTTGTGGGATGGTGAAGTAGGTGGCGTGATGTACTGGACGAGGTCACAATCGTCACGGGTAAAGGAGGTGTCGTTACGGTGCAAGTATGCTTGTGAGGAAGGTGTTATCGCAGGCCTCAAAGCAATTGTCATTCATTTTCAACTATTTATTAGAAGCATCAGGTCGGGTCAAACCCAAATCGCTGGTCGAATCACCCACCCACCCACCCACCCATATCTGAAAGACCATTTTCTTCTTCACCCAACACACAGACACACTCTCACATCGCAGCTTCAAAAACCGAAAGATTCCTTCAACGATCTGCGACCTTCGCGTGTTGCATCTCCAAATCCCACTCCAAAAAAAGTCACAATCTATCGAAAGCAAACAGAGAGCGAATCGGAAGAACAAAAACAAGAAGCAGAAGAAAAAATGGGGTTGGGTTTGTTAGCTTCGAAGGCCATAAGACCCACCTCAAGGCTCCTCCTCGGTTCCCAAAACCCTACCACTTTTCTCCTCCGAACCATCGTCTCCAAGCCTGAGCTTCGGAATCCCGAAGCCAGCGCCGCACAGCCGGAGCAGCCGCCGGCGCCCGATCTCCCGCCGCGGACTCCGCTCGCCGGCGCCCGCGTCCACTTCTCGAACCCCGAGGACGCCATCGAGGTGTTCGTGGATGGCTACCCCGTGAAAATCCCGAAAGGAATGACCGTTCTTCAGGCCTGCGAGGTCGCCGGCGTCGACATCCCGAGGTTCTGCTACCACAGCAGACTCTCCATCGCCGGAAACTGCCGCATGTGCCTCGTCGAGGTCGAGAAATCGCCCAAACCTGTCGCCTCTTGCGCCATGCCCGCTCTCCCTGGGATGAAAATTAAGACTGACACACCTGTTGCAAAGAAGGCTCGAGAAGGAGTGATGGAGTTTTTATTGATGAATCATCCATTAGATTGCCCAATTTGTGATCAGGGTGGGGAATGTGATCTTCAGGATCAGTCAATGGCATTTGGCTCTGATCGTGGGCGGTTCACTGAAGTGAAGAGATCTGTGGTAGATAAAAATCTTGGACCTCTGGTGAAGACTGTGATGACTCGGTGCATTCAATGTACAAGGTGTGTTAGATTTGCAACAGAGGTTGCTGGGGTTCAGGATCTTGGCATGTTAGGTCGTGGCAGTGGAGAGGAGATTGGAACATATGTTGAAAAACTTTTGACAAGTGAGCTTTCTGGAAATGTCATAGATATCTGTCCCGTGGGAGCTCTCACGTCAAAACCTTTTGCATTTAAAGCCCGGAATTGGGAGTTGAAGGGCACAGAGACCATTGATGTTACTGATGCAGTTGGATCCAATATTCGAATTGATAGCAGAGGACCTGAAGTGATGCGCATTGTTCCTCGTTTAAATGAGGACATAAATGAAGAATGGATTTCAGACAAAACCCGCTTTTGTTATGATGGTTTGAAAAGGCAGAGGTTAAATGACCCCATGATTCGTGGTTCTGATGGACGCTTTAAGCCTGTTAACTGGCGTGATGCTCTTGCTGTGGTAGCAGAGGTTGCCCACCAAGTCAAACCGGAAGAAATTGTTGGCATAGCTGGCAAACTTTCTGATGCTGAGTCCATGATTGCACTAAAAGATTTCATAAATAGGATGGGGTCAAATGATGTATGGGGTGAAGGCATTGGTGTAAATACTAATGCTGATTTCAGATCAGGATATATTATGAATACTAGCATTGCTGGTCTTGAAAAAGCGGATGCGTTCCTGTTGGTTGGCACCCAGCCACGGGTGGAAGCTGCCATGGTTAATGCCAGAATACGCAAAACTGTCAGAGCAAACCAAGCCAAAGTTGGGTACATTGGGCCTGCCACTGATTTCAACTACGATCACAGACATCTTGGTACTGGCCCTCAAACACTCCTTGAAATTGCTGAGGGTTGCCACCCATTTTTCAAGACACTCTCAAATGCCAAAAACCCTGTTATCATTGTCGGTGCTGGGGTTTTTGAGAGGAAGGATCAGGATGCAATTTTTGCTGCTGTTGAAACCATTGCACAAAAAGCAAATGTTGTCAGACCTGACTGGAATGGCCTTAATGTATTGCTTCTCCATGCTGCCCAGGCTGCTGCGCTTGACCTTGGACTTGTTCCACAATCTGAGAAAAGCCTTGAGTCTGCAAAATTTGTATATTTGATGGGTGCTGATGATGTTAACTTAGACAAGATCCCAGATGATGCTTTTGTTGTTTATCAAGGTCACCACGGTGACAAGAGTGTTTATCGGGCAAATGTTGTTTTGCCAGCAGCAGCATTCAGTGAGAAGGAAGGGACCTATGAAAATACCGATGGTTTCTCACAACAAACATTGCCTGCAGTTCCAACAGTTGGTGACTCCAGAGATGATTGGAAGATAATTCGAGCTCTATCTGAGGTGGCAGGAGTGCGTTTGCCCTATGATACAATTGGGGCCGTTCGTGCTCGAATCAGTACTGTAGCCCCAAACCTTGTGAAAATGGATGAGAGAGAGCCTGCCACATTACCATCTTCACTCAGACCAACCTTCTCTGAGAAGGTGGACACCACCCCATTCGGGACTGTAGTTGAGAATTTCTATATGACTGATGCCATTACAAGGGCATCAAAGATAATGGCACAATGCAGTGCCATGCTGTTGAAGAAGTGA 4848 0.4585 MELTVFSLFFFFFTFHLPSCFSGQSSSMESVPDLQNTMYASIDGYPCVRLMNLSGTIGCSNPGRDKVVAPILRFENVDKIAEPSAILVSLDEFPTLFTRISDDSSFASKVLGVLVEPTGDVQNKLKGFSPDQKFPQAQFALYHNTSYQWNSIGSGIMWKSYKFPVFLLTESGSKTLQEFVTKNEDKKKSYTSNVAEFDLVMQTVKSGTHDSESCLKEETCLPLGGYSVWSSLPPINISSLQQSKPILLTVASMDSASFFRDRSLGADSPISGLIALLAAVDALSHLDGLGDLSKQLVFAVFTGEAWGYLGSRRFLVELDMHSDAVHGLNHTLIETVIEIGSVGKGLSQGVKNFFAHKEGDSSATNQTVAALKRAQESLISENIKIASASASNPGIPPSSLMSFLEKNPAISGVALEDFDSVFVNKFYHSHLDDLSNVNSSAVVAAASLIARTLYMLASETEDVQNSTLAAINVNVSLVEQLMGCLLDCDPGLSCELVTKYISPMSTCPSHYVGVILDEPSSTPYTGYINDVPRFIWNFLADRTSIPRENNSSDCQHGCNGRDEVCIKAETDGKGVCVLSTTRYVPAYSTRLKFESGVWNVLPPNSSDKMGVVDPVWTESNWNTIVEGVTGLEGDEEVGVSLRVDEGVVDLCTDDEAQAVGEDVNSANDFEDAELGGKGHQGRAEGLVDLMLQRQRLLGLLEGKRVKDDGDGFHECSEEGAGVCAWRMRSPSLWDGEVGGVMYWTRSQSSRVKEVSLRCKYACEEGVIAGLKAIVIHFQLFIRSIRSGQTQIAGRITHPPTHPYLKDHFLLHPTHRHTLTSQLQKPKDSFNDLRPSRVASPNPTPKKVTIYRKQTESESEEQKQEAEEKMGLGLLASKAIRPTSRLLLGSQNPTTFLLRTIVSKPELRNPEASAAQPEQPPAPDLPPRTPLAGARVHFSNPEDAIEVFVDGYPVKIPKGMTVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLVEVEKSPKPVASCAMPALPGMKIKTDTPVAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEVKRSVVDKNLGPLVKTVMTRCIQCTRCVRFATEVAGVQDLGMLGRGSGEEIGTYVEKLLTSELSGNVIDICPVGALTSKPFAFKARNWELKGTETIDVTDAVGSNIRIDSRGPEVMRIVPRLNEDINEEWISDKTRFCYDGLKRQRLNDPMIRGSDGRFKPVNWRDALAVVAEVAHQVKPEEIVGIAGKLSDAESMIALKDFINRMGSNDVWGEGIGVNTNADFRSGYIMNTSIAGLEKADAFLLVGTQPRVEAAMVNARIRKTVRANQAKVGYIGPATDFNYDHRHLGTGPQTLLEIAEGCHPFFKTLSNAKNPVIIVGAGVFERKDQDAIFAAVETIAQKANVVRPDWNGLNVLLLHAAQAAALDLGLVPQSEKSLESAKFVYLMGADDVNLDKIPDDAFVVYQGHHGDKSVYRANVVLPAAAFSEKEGTYENTDGFSQQTLPAVPTVGDSRDDWKIIRALSEVAGVRLPYDTIGAVRARISTVAPNLVKMDEREPATLPSSLRPTFSEKVDTTPFGTVVENFYMTDAITRASKIMAQCSAMLLKK 1615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02175 1615 MobiDBLite consensus disorder prediction 850 867 - -
Gma11g02175 1615 ProSitePatterns Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 1040 1052 IPR000283 GO:0008137|GO:0016020|GO:0042773
Gma11g02175 1615 Gene3D - 1070 1146 - -
Gma11g02175 1615 ProSiteProfiles 2Fe-2S ferredoxin-type iron-sulfur binding domain profile. 942 1020 IPR001041 GO:0051536
Gma11g02175 1615 Pfam NADH-ubiquinone oxidoreductase subunit G, C-terminal 1577 1608 IPR015405 GO:0016651|GO:0051536
Gma11g02175 1615 Pfam Nicastrin small lobe 46 203 IPR041084 -
Gma11g02175 1615 SUPERFAMILY 2Fe-2S ferredoxin-like 944 1016 IPR036010 GO:0051536
Gma11g02175 1615 SUPERFAMILY Zn-dependent exopeptidases 219 454 - -
Gma11g02175 1615 SUPERFAMILY 4Fe-4S ferredoxins 1017 1153 - -
Gma11g02175 1615 ProSiteProfiles His(Cys)3-ligated-type [4Fe-4S] domain profile. 1020 1059 IPR019574 GO:0016491
Gma11g02175 1615 ProSitePatterns Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 973 990 IPR000283 GO:0008137|GO:0016020|GO:0042773
Gma11g02175 1615 Gene3D - 1148 1262 - -
Gma11g02175 1615 Pfam 2Fe-2S iron-sulfur cluster binding domain 942 1019 - -
Gma11g02175 1615 Pfam Nicastrin 246 454 - -
Gma11g02175 1615 Pfam Molybdopterin oxidoreductase 1213 1532 IPR006656 GO:0016491
Gma11g02175 1615 MobiDBLite consensus disorder prediction 908 934 - -
Gma11g02175 1615 MobiDBLite consensus disorder prediction 819 867 - -
Gma11g02175 1615 Coils Coil 1613 1615 - -
Gma11g02175 1615 CDD MopB_Res-Cmplx1_Nad11 1161 1534 - -
Gma11g02175 1615 ProSitePatterns Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 1087 1097 IPR000283 GO:0008137|GO:0016020|GO:0042773
Gma11g02175 1615 CDD fer2 944 1015 IPR001041 GO:0051536
Gma11g02175 1615 TIGRFAM NuoG: NADH dehydrogenase (quinone), G subunit 946 1530 IPR010228 GO:0016651|GO:0051536
Gma11g02175 1615 Gene3D - 1449 1565 - -
Gma11g02175 1615 SMART NADH_G_4Fe_4S_3_2 1025 1065 IPR019574 GO:0016491
Gma11g02175 1615 Pfam NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 1025 1062 IPR019574 GO:0016491
Gma11g02175 1615 ProSiteProfiles Prokaryotic molybdopterin oxidoreductases 4Fe-4S domain profile. 1157 1213 IPR006963 GO:0016491
Gma11g02175 1615 PANTHER NICASTRIN 19 624 IPR008710 GO:0016021|GO:0016485
Gma11g02175 1615 SUPERFAMILY Formate dehydrogenase/DMSO reductase, domains 1-3 1155 1562 - -
Gma11g02175 1615 CDD M28_Nicastrin 40 622 - -
Gma11g02175 1615 Gene3D - 943 1065 - -
Gma11g02175 1615 Gene3D Zn peptidases 174 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02175 Gma-Chr11 36840848 36861447 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02175 K03934 - gmx:100802040 1461.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00395 18 3572676 3578986 Gma11g02175 11 36840848 36861447 GST