Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01588 ATGGCTCAGCAGAAAAGACCCCCAAATAGCAGGGGCTACTACGTTAAGATGAAACTCCTTCAAAAACATGGCAGACCTCATCATCACCATCACCATCACCAGCAAGAAAAAAACTGCTTCTACAGATACTACAAATGGGTTCTCTGGCTTTCTCTTTCTCTCTATTTCTTCACTTCCTACCTCATCAGCAACAACAACAACCACCACACCAAAAAACCTTCTCACGTCTCCAGAGCACTCATCCAATCAAACCACACCACAACTCCTCAACATGCTCTTAACTCTCCAGAATCTTTGAAGAAGTTGAAGGTGTTTGTCTACGACCTTCCTCCGAAGTACAACACGGATTGGTTGACGAACGAGAGGTGCAGCAAACATTTGTTTGCGTCGGAGGTTGCAATTCACAGGGCTTTGTTGACCAGCGAGGTTCGCACGTTTGACCCATACGACGCTGACTTTTTCTTCGTCCCCGTTTACGTGTCTTGCAACTTCAGCACCGTGAATGGCTTCCCCGCGATTGGCCACGCGCGCTCCCTCATCGCGTCCGCGGTAAACCTCATCTCCTCGGAGTACCCCTTCTGGAACCGAAGCAGAGGCTCCGACCACGTCTTCGTCGCGTCGCACGATTTCGGCTCGTGTTTCCACACCCTGGAGGACGTGGCGATGGCTGATGGCGTGCCAGAGATTGTGAGGAACTCGATCGTGTTGCAGACGTTTGGCGTTGTGTTCGATCACCCGTGCCAGAAGGTCGAGCACGTAGTGATTCCACCGTACGTTTCGCCGGAAAGTGTAAGGGACACGATGGAGAATTTTCCGGTGGACGGACGGCGAGATATTTGGGCTTTCTTCCGAGGGAAAATGGAAGTCCATCCCAAGAACGTTAGTGGACGATTTTACAGCAAGAAAGTGCGGACGGTGATATGGAGGAAGTTCAACGGTGACCGGAGGTTTTACCTGCAGAGGCATAGGTTTGCCGGTTACCAGTCAGAGATTGCACGTTCGGTGTTTTGTTTATGTCCTCTGGGGTGGGCCCCATGGAGTCCGAGGCTGGTCGAGTCCGTCGCCTTGGGTTGCGTGCCAGTTGTCATAGCGGACGGTATTCGGTTGCCGTTTGTCTCCGCGGTGAAGTGGTCGGAGATATCGGTGACGGTGGCGGAGAAAGACGTGGGGAGGCTGGCTGAGATACTGGAGCGCGTGGCGGCGACAAACCTGAGCACAATTCAAAGGAACCTGTGGGACCCAGCAACGAGGAGGGCCCTACTTTTCAACAGCCAGGTCCAGGTAGGGGATGCCACGTGGCAGGTCCTGAGGGCTTTGAGTGAAAAGCTTGATAGATCCTTCAGAAGCTCGAGGGTTTCACGCCAATTGGATTTTGACACGTAA 1383 0.5271 MAQQKRPPNSRGYYVKMKLLQKHGRPHHHHHHHQQEKNCFYRYYKWVLWLSLSLYFFTSYLISNNNNHHTKKPSHVSRALIQSNHTTTPQHALNSPESLKKLKVFVYDLPPKYNTDWLTNERCSKHLFASEVAIHRALLTSEVRTFDPYDADFFFVPVYVSCNFSTVNGFPAIGHARSLIASAVNLISSEYPFWNRSRGSDHVFVASHDFGSCFHTLEDVAMADGVPEIVRNSIVLQTFGVVFDHPCQKVEHVVIPPYVSPESVRDTMENFPVDGRRDIWAFFRGKMEVHPKNVSGRFYSKKVRTVIWRKFNGDRRFYLQRHRFAGYQSEIARSVFCLCPLGWAPWSPRLVESVALGCVPVVIADGIRLPFVSAVKWSEISVTVAEKDVGRLAEILERVAATNLSTIQRNLWDPATRRALLFNSQVQVGDATWQVLRALSEKLDRSFRSSRVSRQLDFDT 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01588 460 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 32 450 IPR004263 GO:0006486|GO:0016757
Gma11g01588 460 PANTHER GLUCURONOSYLTRANSFERASE, PUTATIVE-RELATED 32 450 - -
Gma11g01588 460 Pfam Exostosin family 100 398 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01588 Gma-Chr11 17084270 17087598 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01588 K20889 - gmx:100818569 932.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01588 11 17084270 17087598 Gma11g01588 11 17084270 17087598 ECH
Gma12g00715 12 6397198 6400205 Gma11g01588 11 17084270 17087598 GST
Gma13g02868 13 43205302 43206941 Gma11g01588 11 17084270 17087598 PCT
Gma12g01679 12 37182622 37184873 Gma11g01588 11 17084270 17087598 PCT
Gma11g01588 11 17084270 17087598 Gma13g02868 13 43205302 43206941 PCT
Gma11g01588 11 17084270 17087598 Gma12g01679 12 37182622 37184873 PCT