Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01580 ATGCAGCTAGCAATGGCGGCCAACGCTGTCGTTTCACCGTCGCCGTTCCGACCTCAGCCCTTTCTCCGGTCATCCTTCTCCGGCGTCTCCGTCAAGCTCACTCCCCAATCCATAACGCTTTCACGCTCCAAGCCCCTCACCGTCTTCGCCGCCACCAAGAAGGCCGTCGCCGTCCTCAAGGGGACCTCCGCCGTCGAAGGCGTCGCCACTCTCATCCAAGAAGACGATGTAGGCCCGACGACAGTTTCTGTTCGCATCACTGGCCTTACTCCGGGGCTTCATGGTTTTCACCTACATGAGTATGGTGATACGACAAATGGGTGTATTTCTACGGGAGCACATTTTAATCCTAATAAATTGACACATGGTGCTCCTGAGGATGAAGTCCGTCATGCGGGTGACCTGGGAAACATAGTTGCTAATGCAGAGGGTATTTCTTCTTTATCGGTTATCTTCCTCTACTATATACCACTCTCTGGCCCCAATTCAGTAGTTGGAAGAGCCTTGGTGGTCCATGAGCTTGAGGATGACCTTGGAAAGGGTGGGCATGAACTCAGTTTGACAACTGGAAATGCTGGTGGAAGATTAGCATGTGGTGTGGTTGGTTTGACTCCAGCATAA 621 0.5233 MQLAMAANAVVSPSPFRPQPFLRSSFSGVSVKLTPQSITLSRSKPLTVFAATKKAVAVLKGTSAVEGVATLIQEDDVGPTTVSVRITGLTPGLHGFHLHEYGDTTNGCISTGAHFNPNKLTHGAPEDEVRHAGDLGNIVANAEGISSLSVIFLYYIPLSGPNSVVGRALVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPA 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01580 206 ProSitePatterns Copper/Zinc superoxide dismutase signature 1. 95 105 IPR018152 -
Gma11g01580 206 ProSitePatterns Copper/Zinc superoxide dismutase signature 2. 190 201 IPR018152 -
Gma11g01580 206 Gene3D Superoxide dismutase, copper/zinc binding domain 49 205 IPR036423 GO:0006801|GO:0046872
Gma11g01580 206 PANTHER SUPEROXIDE DISMUTASE CU-ZN -RELATED 50 204 IPR024134 -
Gma11g01580 206 PRINTS Cu-Zn-superoxide dismutase family signature 131 140 IPR001424 GO:0006801|GO:0046872
Gma11g01580 206 PRINTS Cu-Zn-superoxide dismutase family signature 176 202 IPR001424 GO:0006801|GO:0046872
Gma11g01580 206 PRINTS Cu-Zn-superoxide dismutase family signature 151 173 IPR001424 GO:0006801|GO:0046872
Gma11g01580 206 PRINTS Cu-Zn-superoxide dismutase family signature 95 117 IPR001424 GO:0006801|GO:0046872
Gma11g01580 206 PANTHER SUPEROXIDE DISMUTASE [CU-ZN] 3 50 204 - -
Gma11g01580 206 CDD Cu-Zn_Superoxide_Dismutase 53 198 IPR001424 GO:0006801|GO:0046872
Gma11g01580 206 SUPERFAMILY Cu,Zn superoxide dismutase-like 54 203 IPR036423 GO:0006801|GO:0046872
Gma11g01580 206 Pfam Copper/zinc superoxide dismutase (SODC) 65 201 IPR001424 GO:0006801|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01580 Gma-Chr11 16986815 16990143 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01580 K04565 - gmx:100815376 377.481
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01580 11 16986815 16990143 Gma11g01580 11 16986815 16990143 ECH
Gma12g00725 12 6509637 6513984 Gma11g01580 11 16986815 16990143 GST