Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01559 ATGTGCACCACTTGGTGGCTTCTCTCTTTGGTGTATGGGTGCTTGCCTGCCACGTTGTTTGGCTTTGAGGCACCAGAGTCACCTGGGGTAAGGCTAAGCCGTGAGGGAGTCACTGCACTTCACCCAGTTGTTCTTGTACCGGGCATTGTGATTGGTGGGTTGGAGCTTTGGGAAGGGAGGTCTTGTGCTGAAGGACTTTTCAGAAAACGGTTGTGGGTGATAGTTTTGTTCAAATCCTCAAAAGGCATTAGAGTCAGGGCAGTGCCAGGGCTTGTTGCTGCTGATAATTTTGCTTCTGGTTATCTTCTTTGGGCAGATTTGATTGAAAATTTGGCAAGAATTGGTTATGAAGGGAGGAATTTGTTCATGTCTGCCTATGACTGGAGACTGTCTTTCCAGAATACTGAGATTCGAGACCAAGCTCTTAGTAGATTGAAGAGTCATATTGAGCTTATGTTTGTAACAAATGGCTATAAGAAAGTGGTAGTGGTACCACAATCTATGGGGGCTATTTATTTTCTCCATTTCCTAAAATGGGTTGAGACACCTCCTCCCATGGGAGGAGGCGGTGGTGGTCCAGGTTGGTGTGACAAGTACATCAAAGCAATCATGAATATTAGCCCTGCATTTCTTGGTGATCCTAGGGCAGTTAGCAATATATTTTCAACCGAAGGCAGTGTTACATTTGTCAGAGCTTTGGCTTCTGGCATTTTAAATTTTGATTACCTTGGTCGTCAAACTCTTGAGCGAGTTATGCGGGTGTGTAGAACGTGGGATTCAATCATCTCATTGATGCCAAAAGGTGGTGAAACCATCTGGGGTGGCTTGGATTGGTGTCTTGAACAATGGAATACCTATGATCAGCAGGAAATTTCATGGGGAAGCAATTCTGCTACCTTTAACTTATCATGTGAGGCTGTGTGGACTGATTATGATGAGATGAGCAGAGAAAGCATCCAAAAAGTTGCTAAAAAAAGGGATTATACTGCGAGTACAGTTTTTGATCTACTTAACTTTGTGGCTCCAAAAATGATGAAGCGTGGTGAGGCTCACTTCTCTCACGGAATAGCAAAGAACTTAGATGATCCAAAATATGCTCACCACAAATACTGGTCTAATCCTCTTGAGACCAAACTACCAGATGCTCCGGATATGGAAATATACTGTCTATATGGCATTGGAATTCTGACTGAAAGATCACATATACACAAGTTCTCCACTTCTGAAAAGGACAAGAGTATTCCTTTCCAAATTGATAGTTCAGTAGATAGAGAAGAGGAGGGAAGTTGGTTACAAAATGGTGTTTATTATGTGGATGGTGATGAGAGTGTGCCTATTGTAAGCTCTGGTTTCATGTGTGCCAAAGGATGA 1371 0.4296 MCTTWWLLSLVYGCLPATLFGFEAPESPGVRLSREGVTALHPVVLVPGIVIGGLELWEGRSCAEGLFRKRLWVIVLFKSSKGIRVRAVPGLVAADNFASGYLLWADLIENLARIGYEGRNLFMSAYDWRLSFQNTEIRDQALSRLKSHIELMFVTNGYKKVVVVPQSMGAIYFLHFLKWVETPPPMGGGGGGPGWCDKYIKAIMNISPAFLGDPRAVSNIFSTEGSVTFVRALASGILNFDYLGRQTLERVMRVCRTWDSIISLMPKGGETIWGGLDWCLEQWNTYDQQEISWGSNSATFNLSCEAVWTDYDEMSRESIQKVAKKRDYTASTVFDLLNFVAPKMMKRGEAHFSHGIAKNLDDPKYAHHKYWSNPLETKLPDAPDMEIYCLYGIGILTERSHIHKFSTSEKDKSIPFQIDSSVDREEEGSWLQNGVYYVDGDESVPIVSSGFMCAKG 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01559 456 Pfam Lecithin:cholesterol acyltransferase 79 454 IPR003386 GO:0006629|GO:0008374
Gma11g01559 456 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 1 290 - -
Gma11g01559 456 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 298 456 - -
Gma11g01559 456 PANTHER PHOSPHOLIPID:DIACYLGLYCEROL ACYLTRANSFERASE 2-RELATED 1 290 - -
Gma11g01559 456 PANTHER PHOSPHOLIPID:DIACYLGLYCEROL ACYLTRANSFERASE 2-RELATED 298 456 - -
Gma11g01559 456 Gene3D alpha/beta hydrolase 43 254 IPR029058 -
Gma11g01559 456 SUPERFAMILY alpha/beta-Hydrolases 89 223 IPR029058 -
Gma11g01559 456 SUPERFAMILY alpha/beta-Hydrolases 39 453 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01559 Gma-Chr11 16699738 16703814 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01559 1 456 Acyl Lipid Metabolism Gene Families AT3G44830 55.993 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01559 K00679 - gmx:100797438 898.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00746 12 6789027 6798588 Gma11g01559 11 16699738 16703814 GST