Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01554 ATGCTCAAAGGACTATGTGTTTGTTATCTTGTACTAATAGTCACTTTCTTTAGCGTATCTGTATCCGGTTATTGGGCATTTGGTAATGAATCTGAAGGCCTCATCTTAAGCAACTTCGTGGACAATGGGAAGCCTCTGGTGCCCAAGTGGTTTATTTACATGACCAACATTTTGATTATAACACAATTATCTGCGGTTGGTGTGGTTTATTTGCAACCAACAAATGAAGTGCTGGAGCAAACATTTGGAGACCCCAAAAGCCCTGAGTTCTCTAAACCCAATGTAATCCCTAGAGTGATTTCTCGGTCATTAGCTACTACTATTTCAACCACTATAGCAGCCATGCTTCCATTTTTTGGAGACATAAACTCTCTTATAGGAGCATTTGGCTTTATCCCACTTGACTTCATCTTGCCTATGGTTTTCTACAATTTGACATTTAAGCCATCTAAGAGAAGCCCTATTTTCTGGTTGAATGTGACAATCGTTGTGGCTTTCTCCGCATTGGGAGCTATAGCAGCAGTTAGGCAGATAGTTCTTGATGCTAAAAATTACCAATTATTTGCTAATATATGA 576 0.3924 MLKGLCVCYLVLIVTFFSVSVSGYWAFGNESEGLILSNFVDNGKPLVPKWFIYMTNILIITQLSAVGVVYLQPTNEVLEQTFGDPKSPEFSKPNVIPRVISRSLATTISTTIAAMLPFFGDINSLIGAFGFIPLDFILPMVFYNLTFKPSKRSPIFWLNVTIVVAFSALGAIAAVRQIVLDAKNYQLFANI 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01554 191 PANTHER GABA TRANSPORTER 1 1 186 - -
Gma11g01554 191 PANTHER OS05G0424000 PROTEIN-RELATED 1 186 - -
Gma11g01554 191 Pfam Transmembrane amino acid transporter protein 3 178 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01554 Gma-Chr11 16611276 16613114 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01554 1 191 Organic Solute Cotransporters AT1G08230 59.184 2.33e-83 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01554 - - gmx:100791114 354.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01554 11 16611276 16613114 Gma11g01554 11 16611276 16613114 ECH