Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01535 ATGGCAACACCAAAACAGTCATATGAGCAGCAACAACAACAACAACCAAATGTGCAGCGAGTGAGGAACTCGGGGATGATTAACAGCAACCAGAGTCCAATGAGGGATGACAAGGAAGAGGAGATGTCAAGATCAGCTTTGGCAATGTTCCGAGCAAAGGAAGAAGAAATTGAAAGGAGAAAAATGGAGGTGAGGGATAAGGTTCACGCTTATCTCGGTCGAGTAGAGGAGGAAACAAAGCGCTTGGCTGAGATTAGAGAAGAGCTTGAGGGTCTCACAGATCCATTGAGGAAGGAAGTTGCAATAGTTCGAAAGAAGATAGACAGTGTTAACAAAGAGTTAAAGCCACTGGGCCAAACCTGCCAGAGAAAGGAGAGAGAATACAAGGAAGCCCTTGAAGTTTTCAATGAGAAAAACAAGGAAAAAGCTCAACTTGTTACCAAACTAATGGAGCTGGTGACTGAAAGCGAGAAGTTGAGGATGAAGAAGCTGGAGGAGTTAAGCAAAAACTTAGATACCCTGCATTGA 528 0.4394 MATPKQSYEQQQQQQPNVQRVRNSGMINSNQSPMRDDKEEEMSRSALAMFRAKEEEIERRKMEVRDKVHAYLGRVEEETKRLAEIREELEGLTDPLRKEVAIVRKKIDSVNKELKPLGQTCQRKEREYKEALEVFNEKNKEKAQLVTKLMELVTESEKLRMKKLEELSKNLDTLH 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01535 175 Pfam Transcriptional activator 22 173 IPR007033 -
Gma11g01535 175 PANTHER - 9 174 - -
Gma11g01535 175 PANTHER RAB6-INTERACTING PROTEIN GORAB 9 174 IPR007033 -
Gma11g01535 175 Coils Coil 68 88 - -
Gma11g01535 175 MobiDBLite consensus disorder prediction 1 32 - -
Gma11g01535 175 Coils Coil 121 141 - -
Gma11g01535 175 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01535 Gma-Chr11 16382277 16384636 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01535 - - gmx:100796368 330.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01535 11 16382277 16384636 Gma11g01535 11 16382277 16384636 ECH
Gma11g01535 11 16382277 16384636 Gma12g00769 12 7094447 7096527 ECH
Gma03g01769 03 43775909 43777959 Gma11g01535 11 16382277 16384636 ECH
Gma19g01815 19 47423113 47424960 Gma11g01535 11 16382277 16384636 ECH
Gma12g00769 12 7094447 7096527 Gma11g01535 11 16382277 16384636 GST