Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01516 ATGCCTAGGGTAAACGAATCTGAAAAAGATGGATCTGAAACCGAAACCCTAAAACCAATCATGGATCCATTTCCCTTTCCACATTTAGCTACCACGAAACGTAATTTTAATTTCTCTCTCAAGAGTCATTTTCCGATGAAACGCACCGTTCGGCCCCTCTTCGCGCTCCTCCTCCTCCTCGTCTTCGCTGCCACCCTCACCTCACGCGCCGTCCTCCGCCGCGGCATCCTCTCCATCGAGCTCGAATCCCGCGTCCGGATCCGCCGCCCTCCGCCGCAGCTCAACTCCACGCTCCTCCACCACGCCGCCGTCGAAATCGGCGAGGAGAAGTTCAAGCAAGAGATTCAGAGCCTCCTCGACGGCAACTTCGGCAGCCAAGCGCGCCACCGCACCTTCGTCTCCTGGCGCCGCTTCATCCACCATGACCGCGGCGGCGCCGAAGGCGCCGTGGCCAACCTCCCGGCGACGCTCCGCTCGCCGCTCTTCTATCGCTACTGGCTCGACTTCCGGAAGGTCCTCCACGACTGGTTCCGGAAGCGACGATTCCAACCCGGTATCATGTCCGAGTTGACTCGGTCAATTAAGCTTCCAATTGATTCACACAACAACAACAAACTACAAACCAATAACAAAAATAAAAACAAATACTCTTCTTGTGCCGTAGTTGGAAACAGTGGAATTTTGCTGAATAGAAACTACGGTAGTGAAATTGATTCCCATGAGGTTGTGATAAGGTTAAACAATGCTAGGGTTGATCACTTTGAAACCAAGGTTGGGAAAAAAACTAGCATTTCATTCATGAATAGTAACATCTTGCATTTGTGTGCTAGAAGGGGAGGGTGCTTTTGCCACCCTTATGGTGATAACGTTCCAATTGTAATGTACATTTGTCAAGCCGTGCATTTCTTGGACTACACTGTGTGCAATGCTTCTCACAAGGCTCCTTTGTTGGTCACTGATCCTAGGTTTGATGTGTTGTGTGCGAGGATTGTGAAGTACTATTCGTTGAAGAGGTTTGTGGAGGAGAGTGGGAAGGGTTTGGAGAAGTGGGGTGAGGCTCATGATGGTTCTCTTTTTCACTACTCTTCAGGGATGCAGGCTGTGATACTGGCTTTGGGGATTTGTGATAGGGTTAGCATTTTTGGGTTTGGGAAATTGGCTTCTGCTAAGCACCATTACCACACTAACCAGAAGGCTGAGCTTCACTTGCATGATTATGAGGCTGAGTATGCGTTTTATAGGGACCTTGTGGATGGGAATAGGGCTATACCGTTTCTTGAGGACAGGTTTAAGGTTCCTCCTGTTGTTATGTATCAGTGA 1320 0.497 MPRVNESEKDGSETETLKPIMDPFPFPHLATTKRNFNFSLKSHFPMKRTVRPLFALLLLLVFAATLTSRAVLRRGILSIELESRVRIRRPPPQLNSTLLHHAAVEIGEEKFKQEIQSLLDGNFGSQARHRTFVSWRRFIHHDRGGAEGAVANLPATLRSPLFYRYWLDFRKVLHDWFRKRRFQPGIMSELTRSIKLPIDSHNNNKLQTNNKNKNKYSSCAVVGNSGILLNRNYGSEIDSHEVVIRLNNARVDHFETKVGKKTSISFMNSNILHLCARRGGCFCHPYGDNVPIVMYICQAVHFLDYTVCNASHKAPLLVTDPRFDVLCARIVKYYSLKRFVEESGKGLEKWGEAHDGSLFHYSSGMQAVILALGICDRVSIFGFGKLASAKHHYHTNQKAELHLHDYEAEYAFYRDLVDGNRAIPFLEDRFKVPPVVMYQ 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01516 439 PANTHER BETA-1,6-GALACTOSYLTRANSFERASE GALT29A 45 439 - -
Gma11g01516 439 MobiDBLite consensus disorder prediction 1 20 - -
Gma11g01516 439 MobiDBLite consensus disorder prediction 1 16 - -
Gma11g01516 439 PIRSF Sialyl_trans 45 302 IPR012163 GO:0006486|GO:0008373
Gma11g01516 439 PIRSF Sialyl_trans 328 427 IPR012163 GO:0006486|GO:0008373
Gma11g01516 439 Pfam Glycosyltransferase family 29 (sialyltransferase) 190 418 IPR001675 GO:0006486|GO:0008373
Gma11g01516 439 Gene3D Glycosyl transferase family 29 97 423 IPR038578 -
Gma11g01516 439 PANTHER BETA-1,6-GALACTOSYLTRANSFERASE GALT29A 45 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01516 Gma-Chr11 16053495 16055234 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01516 215 383 Glycosyltransferase AT3G48820 24.852 1.72e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01516 K00786 - gmx:100789506 883.634
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01516 11 16053495 16055234 Gma11g01516 11 16053495 16055234 ECH
Gma12g00785 12 7289820 7290881 Gma11g01516 11 16053495 16055234 GST