Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01320 ATGGAATTTCCCACTCTTAAACTTTTCTTCTTCATCTTCTTACTCCTCACATCAACCCATGCAAGATCCGCACCCCCAACCACAAACCTATTCCGAGAATACATTGGAGCCGAGTTCAACAACGTTAAATTCTCCGATGTCCCTATCAACCCAAGTGTTCAATTCCACTTCATTCTCTCCTTCGCTATCGACTACGACACGTCATCATCCTCCTCTCCAACCAATGGAAACTTCAATATCTTTTGGGACACCGGCAACCTAAGCCCCACCCAAGTTTCCGCCATCAAAACCAAACACCCAAACGTCAAAGTTGCCCTAAGTCTCGGAGGAGATAGCGTTGCAAATGGCTACGCTTACTTCAACCCCTCTTCAATCGATTCATGGGTTTCCAACGCGGTTTCTTCACTCACAAGCATCATCAAACAGTACAACCTAGACGGAATCGACATCGACTACGAGCATTTCAAGACGGACCCCGAAACCTTTTCTGAGTGCGTGGGGAGGCTAATCAAAACCCTAAAATCCAATGGGGTCATCAAATTTGCCTCCATTGCTCCATTTGACGATGAACAAGTTCAGAGCCACTACTTGGCTTTGTGGAAGAGTTATGGGAACCTTATAGATTATGTTAACTTCCAGTTTTATGCATATGACAAGGGCACAAGCGTGGCACAATTTATCGATTATTTCAACACACAGAGTTCGAAGTATAACGGTGGGAAGGTGTTGGTGAGTTTCATCAGTGATGGGAGTGGTGGGCTGGCACCAAATGATGGGTTCTTCACGGCATGTCATACCCTAAAGAGTGAGCAAAAACTTCATGGCATATTTGTGTGGAGTGCTGATGATTCCATGAAAAGCGGTTTCCCATATGAGAAGCAATCACAAGCCCTTTTAGCTATACCCTAG 909 0.451 MEFPTLKLFFFIFLLLTSTHARSAPPTTNLFREYIGAEFNNVKFSDVPINPSVQFHFILSFAIDYDTSSSSSPTNGNFNIFWDTGNLSPTQVSAIKTKHPNVKVALSLGGDSVANGYAYFNPSSIDSWVSNAVSSLTSIIKQYNLDGIDIDYEHFKTDPETFSECVGRLIKTLKSNGVIKFASIAPFDDEQVQSHYLALWKSYGNLIDYVNFQFYAYDKGTSVAQFIDYFNTQSSKYNGGKVLVSFISDGSGGLAPNDGFFTACHTLKSEQKLHGIFVWSADDSMKSGFPYEKQSQALLAIP 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01320 302 Pfam Glycosyl hydrolases family 18 56 219 IPR001223 GO:0005975
Gma11g01320 302 PANTHER CHITINASE 2-LIKE 10 300 - -
Gma11g01320 302 Gene3D Glycosidases 27 301 - -
Gma11g01320 302 SUPERFAMILY (Trans)glycosidases 30 294 IPR017853 -
Gma11g01320 302 ProSitePatterns Glycosyl hydrolases family 18 (GH18) active site signature. 145 153 IPR001579 GO:0004553|GO:0005975
Gma11g01320 302 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 29 302 IPR001223 GO:0005975
Gma11g01320 302 PANTHER 2, PUTATIVE, EXPRESSED-RELATED 10 300 - -
Gma11g01320 302 PRINTS 2-S globulin family signature 28 41 IPR000677 -
Gma11g01320 302 PRINTS 2-S globulin family signature 75 90 IPR000677 -
Gma11g01320 302 PRINTS 2-S globulin family signature 92 110 IPR000677 -
Gma11g01320 302 PRINTS 2-S globulin family signature 262 281 IPR000677 -
Gma11g01320 302 CDD GH18_narbonin 30 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01320 Gma-Chr11 11340307 11341215 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01320 - - gmx:100810745 609.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01320 11 11340307 11341215 Gma11g01320 11 11340307 11341215 ECH
Gma13g02951 13 44076876 44077817 Gma11g01320 11 11340307 11341215 PCT
Gma15g00413 15 3454379 3455428 Gma11g01320 11 11340307 11341215 PCT
Gma11g01320 11 11340307 11341215 Gma13g02951 13 44076876 44077817 PCT
Gma11g01320 11 11340307 11341215 Gma15g00413 15 3454379 3455428 PCT