Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01202 ATGGCCTCTAGACTCGCCCTCCGCTTCAGATCCCATCTCCTCCGCACCGCCTCCCTCCTTCAAACCTTGCCGCCGCCGCCCCTCTCCCTCCACCGCCTCCTCTCCACTTCCCGCCGCGCGCCTCCGCGCTCCAAAAAATCAGTCGACATCGGCGCGCGCGCGCGTCAGCTCCAGACGCGGCGCCTCTGGACCTACGCGCTCACCTTCGGCGGCCTCGCGGGCTTCGTCGTGATCGTCCTCAACAACTTCCAAGACCAGCTCGTCTTCTACGTCACCCCAACCGAAGCCCTCGAAAAATACGCCACCAACCCCACAAAAGCGCGGTTCCGGTTGGGAGGCCTTGTTCTCGAAGGCAGCGTGGTTTACCCGGCGTCGTCGCCTGAGGTGGAGTTCGTCGTCACCGATCTCATCTCCGACATGGTGGTACGGTACGAGGGATCGTTGCCGGATTTGTTCAGGGAAGGGCACTCTGTGGTTGTGGAAGGGCTCGTGAAACCGTTTACGGAGGAGATCAGGAAGGAGGTGTCGGTGAAGAACGTTTCCGAGAAGGCGAGGAAGATAGAGTGCTATTTTTCGGCTACCGAGGTTCTCGCCAAGCATGATGAGAAGTACATGCCTAAAGAAGTTGCTGCTGCTATTGAGAAGAATAAGAAGATTATTGAGGATGCTGCCACTGCCACCGTGGCCGCCGCCGCCACCGCGGAGGGACCGAAGACACCATAG 723 0.5989 MASRLALRFRSHLLRTASLLQTLPPPPLSLHRLLSTSRRAPPRSKKSVDIGARARQLQTRRLWTYALTFGGLAGFVVIVLNNFQDQLVFYVTPTEALEKYATNPTKARFRLGGLVLEGSVVYPASSPEVEFVVTDLISDMVVRYEGSLPDLFREGHSVVVEGLVKPFTEEIRKEVSVKNVSEKARKIECYFSATEVLAKHDEKYMPKEVAAAIEKNKKIIEDAATATVAAAATAEGPKTP 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01202 240 Hamap Cytochrome c-type biogenesis protein CcmE [ccmE]. 55 217 IPR004329 GO:0017003|GO:0017004|GO:0020037
Gma11g01202 240 Pfam CcmE 58 207 IPR004329 GO:0017003|GO:0017004|GO:0020037
Gma11g01202 240 PANTHER CYTOCHROME C-TYPE BIOGENESIS PROTEIN CCME HOMOLOG, MITOCHONDRIAL 1 231 IPR004329 GO:0017003|GO:0017004|GO:0020037
Gma11g01202 240 Gene3D - 83 213 IPR012340 -
Gma11g01202 240 SUPERFAMILY Heme chaperone CcmE 83 212 IPR036127 GO:0005886|GO:0017003|GO:0017004
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01202 Gma-Chr11 10259897 10261091 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01202 - - gmx:121172629 424.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01202 11 10259897 10261091 Gma11g01202 11 10259897 10261091 ECH
Gma12g00503 12 4203155 4204283 Gma11g01202 11 10259897 10261091 GST