Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01087 ATGGAGGAGAAACGCCGCGACGCCGCTCCCTCCGCCGCCGATTCGCCGGCATCAGAGCCCGCAACCTCTCGCCGCCGCGCCGGAGCCAACAAGAGGAAGTCCGGCGCCCTCAGCGCCTCCGGTTCCTCCTCCGCGCCCTCCAAACGCGCCTCTCGCGACAAGGCCTCACCGCTCCACCCTCCTCCCCTCCACAATGGCCCCCTCACCAGGGCCCGCCAAACCCCCAACAACCTCGCCTCCGCCTCCTCTTCCGCCGGCGCTTCCGCTCCCGCCGCCGTCAAACGCTCTGAACGCGCCCACCCTTCCGCCGCCGAGTCCGCCGCGCTCGCTGAGCAGCTCAAGAAGGAGAGCGAGTGGGAGACTCTCGAGGCCGCGATTGAAGCCGAATTCGAAGCTATCAGATCTCGCGGTGCCAATGCTCACGTGGTTCCCACTCACAGCGGTTGGTTTTCATGGTCATGTATTCATCCAATTGAGAAGCAAATGTTGCCTTCTTTCTTTAATAGCAAGACTGATAATCGGACTCCTGATGTATACATGGAGATAAGGAATTGGATAATGAAGAAGTTTCATTCAAATCCAAACGTACAAATTGAATTGAAAGATATGTCACAGCTTAATGTTGGAGACTCAGATGCTAGGCAAGAGGTAATGGAGTTTTTGGACTATTGGGGTTTAATTAACTTCCACCCATTCCCTTCAATGGATTCTGCTATGGCCACTGGCAGTGATGATGGAGAAGCTGAAAAGAATTCATTGCTTGAAAAATTGTATCACTTTGAAACTCTCCAATTATGTCCACCTGTTCAAAGGTCTAGCCAAATGACTCCAGCTACTACCTCTGGCTTGTTTCCGGAGTCTACAATTGCTGAAGAGTTGGTGAAACAAGAGGGGCCAGCAGTTGAGATGCTTGAGTACCATTGCAACTCTTGTTCTGCTGATTGTTCTCGCAAACGTTACCATTGCCAGAAGCAGGCAGATTTTGATCTATGTACCGACTGCTTTAGTAATAGAAGATTTGGCTCTGGCATGTCTTCGTTGGATTTTATACTCATGGAACCAGCTGAAGTTGCAGGGGTTAATGGTGGAAAGTGGACTGATCAAGAGACTCTTCTGCTCCTTGAAGCATTAGAACTTTATAAAGAAAATTGGAATGAAATTGCAGAACATGTTGGAACAAAAACAAAAGCTCAGTGCATATTACACTTTGTTCAAATGCCAATTGAGGATACCTTTGTTGACTGTGATGATGATGTTGTTGCTGTTTGCAAAGAAACTGTGGATCCAGTTGCAACAAACAATGACTCATCTATGGACAAGGATGCTTCAGAATGTATTGAGAATGATACTAGTGATGGCATCAAAGACAATGATAAAACTTCCAAGGCTGAAGATCTTGAAGTGAAAGTGAATCAGGAGGAGACTACAAAGTTACAAGAAGGCAGTGATGAGAAATCTACCGAGGGAACTTCTAAATCAGAAGATGCTGTTAAGGTAAAGATTGATCAAGAAGCAGGCAATGACTGTGCTATAAATGCTCTTAAGGAAGCATTTGCAGCTGTTGGTTATTCTCCTGGACCTGAAGGCCCTTCTTCATTTGCTGAAGTGGGTAATCCTGTCATGGCACTGGCAACTTTCCTTGCACACTTGGTGGGTTCTGATGTGGCTGTTGCTTCAGCTCATAGCTCCATAAAATCCATGTCAAGAAATTCACCTGGCACCGAGCTTGCGGCAAGGTGTTGCTTTCTTTTAAAAGATCCCCCAGATAATGAGAAGGAACCGACTAATTCTGAAAGGGATTCTAAAAGTGAGGGAGATCAGGATGAAGTAAATGTAAAACAGGATAAACCAACATTGGAGGATAAAGATTTACCGAATGATCACAGTAATACAAAAATTGAAACTAATGCTTTAGAAGTCAAGGGACAGCCGGCTTCTACAGATGATGGAGCCTTGGAAAAACCCATTTCTTCAAAGGAGCAAGCAGTGAGTAATCATGAAGGTGGGCTTGACAATGGTAATGATCCCAACAATGCAAAGCTACCCAATGATCAAGCACCAGCCACTCTGCATAATTCAGGTGGTTCAACATCCAAGGCTGAAATTCCACTTTGTTCTGACAAGGCTCAGGAGGAAACTTTAATTGAAGAATCTTGCCCTTCTGTAAAAGACAAACATGTGTCTGATTCTCTTCTATCAGACACATCAAAAGATGCTGAAATGGTTTCTAATTCTATTCCCTCAACTAAGAGCAAGCCTCAAAATCCAGAGCCTACAAATCCAGCTTGTGAATCTCTAGAAACAACGGACTCAGTAATGGATGTTGATGGAGTTTCTAATTCCTTGCCATCGGAAAAGATTGACTCTCAGCCACTAATTACGTCAAAATCATCCCAATGTAATGGGACAGAAAAGGATGTAGATATGATGTCACCTTCAAATCCTGTTGTATCAAATTCTGGTGCTGAAAATGGTCCAAATACAGGGGCAGGTAAAGATCATGCAGATAATGGAGCAAAAGTGGAAGATGATGGTACTGAGACTAAACAGGATAGCAGTTTTGAGAAAGTGAAACGTGCTGCAGTTTCTACACTTGCTGCAGCAGCAGCAAAAGCCAAACTTCTAGCAAATCAGGAAGAAGACCAAATTCGACAGCTTACTTCCTTGTTGATAGAAAAGCAGTTGCACAAGTTGGAAACAAAGTTGGCTTTTTTCAATGATGTGGAGAATGTGGTGATGAGGGCAAGGGAGCATGTAGAGCGATCACGGCATAAGCTTTATCATGAGCGTGCTTTGATAATTGCATCACGGCTTGGTATACCACCTTCCTCATCTAGAGGTGTACCACCATCTATAACTACCAATAGAATTCCAACAAATATTGCAAACTCACTCCCAAGACCACAAATGATGATGAATCCACCAAGGCCACTGATTTCTAGACCTGCAGGCACTGTAGCAACTACTCTTCAAAACCCATTAGTATCTTCAACTGCAGCAGGAAATTCAGTTCGGCCATCTAACCAGGAAAAGCTTTCTTCTGTTGGGACAAAATAA 3057 0.4495 MEEKRRDAAPSAADSPASEPATSRRRAGANKRKSGALSASGSSSAPSKRASRDKASPLHPPPLHNGPLTRARQTPNNLASASSSAGASAPAAVKRSERAHPSAAESAALAEQLKKESEWETLEAAIEAEFEAIRSRGANAHVVPTHSGWFSWSCIHPIEKQMLPSFFNSKTDNRTPDVYMEIRNWIMKKFHSNPNVQIELKDMSQLNVGDSDARQEVMEFLDYWGLINFHPFPSMDSAMATGSDDGEAEKNSLLEKLYHFETLQLCPPVQRSSQMTPATTSGLFPESTIAEELVKQEGPAVEMLEYHCNSCSADCSRKRYHCQKQADFDLCTDCFSNRRFGSGMSSLDFILMEPAEVAGVNGGKWTDQETLLLLEALELYKENWNEIAEHVGTKTKAQCILHFVQMPIEDTFVDCDDDVVAVCKETVDPVATNNDSSMDKDASECIENDTSDGIKDNDKTSKAEDLEVKVNQEETTKLQEGSDEKSTEGTSKSEDAVKVKIDQEAGNDCAINALKEAFAAVGYSPGPEGPSSFAEVGNPVMALATFLAHLVGSDVAVASAHSSIKSMSRNSPGTELAARCCFLLKDPPDNEKEPTNSERDSKSEGDQDEVNVKQDKPTLEDKDLPNDHSNTKIETNALEVKGQPASTDDGALEKPISSKEQAVSNHEGGLDNGNDPNNAKLPNDQAPATLHNSGGSTSKAEIPLCSDKAQEETLIEESCPSVKDKHVSDSLLSDTSKDAEMVSNSIPSTKSKPQNPEPTNPACESLETTDSVMDVDGVSNSLPSEKIDSQPLITSKSSQCNGTEKDVDMMSPSNPVVSNSGAENGPNTGAGKDHADNGAKVEDDGTETKQDSSFEKVKRAAVSTLAAAAAKAKLLANQEEDQIRQLTSLLIEKQLHKLETKLAFFNDVENVVMRAREHVERSRHKLYHERALIIASRLGIPPSSSRGVPPSITTNRIPTNIANSLPRPQMMMNPPRPLISRPAGTVATTLQNPLVSSTAAGNSVRPSNQEKLSSVGTK 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01087 1018 PANTHER SWI/SNF COMPLEX SUBUNIT SWI3D 41 982 - -
Gma11g01087 1018 SMART zz_5 302 346 IPR000433 GO:0008270
Gma11g01087 1018 CDD SANT 381 406 IPR001005 -
Gma11g01087 1018 MobiDBLite consensus disorder prediction 585 629 - -
Gma11g01087 1018 Gene3D - 147 232 IPR036388 -
Gma11g01087 1018 SMART sant 361 409 IPR001005 -
Gma11g01087 1018 Pfam SWIRM-associated region 1 864 940 IPR032451 -
Gma11g01087 1018 MobiDBLite consensus disorder prediction 584 856 - -
Gma11g01087 1018 CDD ZZ_RSC8 306 350 IPR041984 -
Gma11g01087 1018 MobiDBLite consensus disorder prediction 658 700 - -
Gma11g01087 1018 MobiDBLite consensus disorder prediction 440 497 - -
Gma11g01087 1018 MobiDBLite consensus disorder prediction 835 856 - -
Gma11g01087 1018 Pfam Myb-like DNA-binding domain 363 405 IPR001005 -
Gma11g01087 1018 SUPERFAMILY Homeodomain-like 147 230 IPR009057 -
Gma11g01087 1018 Pfam Zinc finger, ZZ type 305 340 IPR000433 GO:0008270
Gma11g01087 1018 ProSiteProfiles Myb-like domain profile. 357 407 IPR001005 -
Gma11g01087 1018 SUPERFAMILY Homeodomain-like 360 412 IPR009057 -
Gma11g01087 1018 Pfam SWIRM domain 144 229 IPR007526 GO:0005515
Gma11g01087 1018 PANTHER SWI/SNF COMPLEX-RELATED 41 982 - -
Gma11g01087 1018 Gene3D - 300 349 IPR043145 -
Gma11g01087 1018 MobiDBLite consensus disorder prediction 734 826 - -
Gma11g01087 1018 ProSiteProfiles Zinc finger ZZ-type profile. 303 357 IPR000433 GO:0008270
Gma11g01087 1018 MobiDBLite consensus disorder prediction 992 1018 - -
Gma11g01087 1018 ProSitePatterns Zinc finger ZZ-type signature. 308 334 IPR000433 GO:0008270
Gma11g01087 1018 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 360 399 IPR017930 -
Gma11g01087 1018 MobiDBLite consensus disorder prediction 430 497 - -
Gma11g01087 1018 Gene3D - 360 411 - -
Gma11g01087 1018 Coils Coil 869 889 - -
Gma11g01087 1018 SUPERFAMILY RING/U-box 298 351 - -
Gma11g01087 1018 MobiDBLite consensus disorder prediction 710 733 - -
Gma11g01087 1018 ProSiteProfiles SANT domain profile. 364 411 IPR017884 -
Gma11g01087 1018 MobiDBLite consensus disorder prediction 1 109 - -
Gma11g01087 1018 MobiDBLite consensus disorder prediction 69 89 - -
Gma11g01087 1018 MobiDBLite consensus disorder prediction 35 50 - -
Gma11g01087 1018 ProSiteProfiles SWIRM domain profile. 141 238 IPR007526 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01087 Gma-Chr11 9159978 9166918 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01087 306 403 EF-hand Containing Proteins AT3G07740 37.069 1.42e-12 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01087 K11649 - gmx:100799723 1912.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01087 11 9159978 9166918 Gma11g01087 11 9159978 9166918 ECH
Gma12g00398 12 3248760 3255626 Gma11g01087 11 9159978 9166918 GST