Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01026 ATGGCTTTGAAACTCTCGTCACTATCTCTTCACTCCTCTCTCCGCCACCAGCACCCTAATTCGTCGCATTCAAACCATCGCATTCCCCTTCGTTTCTTTGCACCTTCCCTTCCTCCCACTTCGTGTCTCTCCGGCGCAGCCTCAGTCTCCACATTTCATCGCACTCTCTTCGCCGTAACCGTTCGCGCATTTCAAAGCCAAGACGAAAGCAAAAGCAGTGATGTTTTTGAAGAAGAAGAAAAAGACGAAGAAATATCGAGGCAGGGTGAGAAAAAGGAACTCGCGAAGCAAAGCATATGGAGTCAGATAAAGGAAATTGTGATGTTTACAGGACCAGCAACGGGTCTTTGGATTTGTGGACCGCTTATGAGTCTCATCGATACTGCAGTTATTGGTCAGAGAAGCTCAATTGAGCTTGCTGCTTTAGCAGGTCCTGCTACAGTTGTTTGCGACTACATGAGCTACGTGTTCATGTTTCTATCAATTGCTACTTCCAATATGGTTGCTACTGCCCTTGCCAAGCAGGACAAAGAAGAAGTACAGCATCACATATCTGTCTTGCTTTTTATTGGGTTATCTTGTGGCGTTGGGATGCTTTTGTTCTCAAGGCTATTTGGTGCATCACTAATAACTGCTTTCACTGGGCCAAAGAATGCACACGTAGTACCTGCAGCTAGCAATTATGTGAAGATTCGAGGCTTGGCATGGCCTGCTTTACTTGTTGGATGGGTTGCTCAGAGTGCAAGtcttggtatgaaagattccttgggacccttgaaagctttggctgctgctacagttataaatttcgctggttgtatacttttgtgcacctatttaggctatggaattgtaggggctgcgtgggctacaatggttgcccaaGTTGTTGCCGCTTACATGATGATTCAAAATCTAAACATGAAGGGATATAATGCACTTGCCTTCTCCATTCCTACAGGGAAGGAAATTCTGATGATACTTGGGCTTGCTGCTCCTGTTTTTTTGACACTGATGTCAAAGGTGGCTTTCTACGCACTACTTATATATTTTGCTACATCAATGGGTACACATACAATGGCTGCTCATCAAGTCATGGTCCAAACTTATGGTATGTGTACAGTATGGGGTGAACCTCTCTCCCAAACTGCTCAATCATTTATGCCTGAATTGATATATGGAGTAAATAGGAGTTTGTCAAAGGCCCGATTGCTTCTAAAGTCTCTTGTGACAATTGGAGCTATGCTTGGATTATTGTTAGGGATTGTTGGAACATCAGTACCTTGGTTATTTCCCTATGTTTTTACTCCTGATCGGATGGTGATTCAGGAGATGCATAAGGTGCTGATTCCATACTTTATAGCGCTGGCTATAACACCCCCTACTCACAGCCTCGAGGGAACGTTGCTGGCTGGACGGGATCTGAAATTTATAAGTTTATCAATGACTGGATGCTTTTGTGTGGGTACATTAGTATTATGGGCTTTGAGTAGTAGATTCGGTTTGCTAGGCTGCTGGTTTTCCCTCGCATTATTTCAATGGGCTCGGTTTTCAATTGCCCTCCGGCGCCTTCTTTCTCCCAAGGGCATTTTATACTCGGAAGATACAGATCAGTATAAGCTGCGAAAGCTAAGGACTGCCTAA 1644 0.4063 MALKLSSLSLHSSLRHQHPNSSHSNHRIPLRFFAPSLPPTSCLSGAASVSTFHRTLFAVTVRAFQSQDESKSSDVFEEEEKDEEISRQGEKKELAKQSIWSQIKEIVMFTGPATGLWICGPLMSLIDTAVIGQRSSIELAALAGPATVVCDYMSYVFMFLSIATSNMVATALAKQDKEEVQHHISVLLFIGLSCGVGMLLFSRLFGASLITAFTGPKNAHVVPAASNYVKIRGLAWPALLVGWVAQSASLGMKDSLGPLKALAAATVINFAGCILLCTYLGYGIVGAAWATMVAQVVAAYMMIQNLNMKGYNALAFSIPTGKEILMILGLAAPVFLTLMSKVAFYALLIYFATSMGTHTMAAHQVMVQTYGMCTVWGEPLSQTAQSFMPELIYGVNRSLSKARLLLKSLVTIGAMLGLLLGIVGTSVPWLFPYVFTPDRMVIQEMHKVLIPYFIALAITPPTHSLEGTLLAGRDLKFISLSMTGCFCVGTLVLWALSSRFGLLGCWFSLALFQWARFSIALRRLLSPKGILYSEDTDQYKLRKLRTA 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01026 547 CDD MATE_DinF_like 104 526 IPR044644 -
Gma11g01026 547 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 35 536 IPR044644 -
Gma11g01026 547 TIGRFAM matE: MATE efflux family protein 114 506 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gma11g01026 547 Pfam MatE 120 273 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gma11g01026 547 MobiDBLite consensus disorder prediction 70 89 - -
Gma11g01026 547 PANTHER PROTEIN DETOXIFICATION 46, CHLOROPLASTIC 35 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01026 Gma-Chr11 8690675 8696498 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01026 K03327 - gmx:100778835 1034.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01026 11 8690675 8696498 Gma11g01026 11 8690675 8696498 ECH