Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01024 ATGGCTTTCAAACTGAAATCACTACCTCTCCTTTGCTCTCTTCACTCCCCTTCCCGCCAAAACCCTAATTCAACACTCTCAAACCATCACTTTTCTCGTCGCTTCTTCGCACCTTCCATTCCTCCCACCCTGTGCCTATCCGGCGCAGCCTCAGCGTCCACCTTTCATCGCCATCGCTTCTTCGTAACCGCTCGAAGCCAAGACGAAGACCAGATCACTGAGGCTCTTGAACAAGAAGAAGAGAAAGACAACGAAGAAATATCGAGGCAGGGTGAGAAAAAGGAACTCGCGAAGCAAGGCATATGGGATCAGATAAAGGAAATTGTGATGTTCACAGGACCAGCAACTGGACTTTGGATATGTGGACCACTTATGAGTCTCATCGATACTGCAGTTATTGGTCAGAGAAGTTCAATTGAGCTTGCTGCTTTAGGTCCTGCTACAGTTGTTTGTGATTACATGTGCTACGTGTTCATGTTTCTATCAATTGCTACTTCCAATATGGTTGCTACTGCCCTTGCCAAACAGGACAAAGAAGAAGTACAACATCACATATCTGTATTGCTTTTTGTTGGGTTATCTTGTGGCATTGCGATGCTTTTGTTCACAAGGCTATTTGGTGCTGCTATAATAACTGCTTTCACTGGACCAAAGAATGTACACGTAGTACCTGCAGCTAGCAATTATGTAAAGATTCGAGGCTTGGCATCACCTGCTTTACTTGTTGGATGGGTAGCTCAGAGTGCAAGtcttggtatgaaagattccttgggacccttgaaagctttagctgctgctacagttataaatgtcgctggttgtgtacttttgtgcacctatttaggttatggaattgtaggggctgcgtgggctacaatggtttcacaaGTTGTTGCTTCTTACATGATGATTCAAAATCTAAATATGAAGGGATATAATGCACTTGCCTTCTCCATTCCTTCAGGGAAGGAACTTCTGACGATATTTGGGCTTGCTGCTCCTGTTTTTATAACATTGATGTCAAAGGTTGTGGCTTTTTACGCACTACTTATATATTTTGCTACATCAATGGGTACACATACAATGGCTGCTCATCAAGTCATGGTCCAAACCTATTTAATGTGTACCGTATGGGGTGAACCTCTCTCCCAAACCTCTCAATCATTTATGCCTGAATTGATATATGGAGTAAATCGGAGTTTGTCAAAGGCCCGAATGCTTCTAAGGTCTCTCGTGATAATTGGAGCTATACTTGGATTGTTGTTAGGGATTATTGGAACATCGGTTCCTTGGTTATTTCCCAATATTTTTACACCTGATCGGATGGTCATCCAGGAGATGCATAAGGTGCTGATTCCATACTTTATAGCCCTGGCTGTAACACCCCCTACTGTCAGCCTTGAGGGAACGTTGCTGGCTGGACGGGATCTGAAATTTATAAGTTTGTCAATGAGTGGATGCTTTTGTGTGGGTTCACTAGTATTATGGGCTTTGAGTAGTAGATACGGTTTGCTTGGCTGCTGGTTTTCCCTCGCATTATTTCAATGGGCTCGGTTTTCAATGGCCCTCCAGCGCCTTCTTTCTCCCAAAGGCATCTTATACTCGGAAGATACAGAACAGTATAAGCTGCTAAAGCTAAGGACTGCCTAG 1650 0.4012 MAFKLKSLPLLCSLHSPSRQNPNSTLSNHHFSRRFFAPSIPPTLCLSGAASASTFHRHRFFVTARSQDEDQITEALEQEEEKDNEEISRQGEKKELAKQGIWDQIKEIVMFTGPATGLWICGPLMSLIDTAVIGQRSSIELAALGPATVVCDYMCYVFMFLSIATSNMVATALAKQDKEEVQHHISVLLFVGLSCGIAMLLFTRLFGAAIITAFTGPKNVHVVPAASNYVKIRGLASPALLVGWVAQSASLGMKDSLGPLKALAAATVINVAGCVLLCTYLGYGIVGAAWATMVSQVVASYMMIQNLNMKGYNALAFSIPSGKELLTIFGLAAPVFITLMSKVVAFYALLIYFATSMGTHTMAAHQVMVQTYLMCTVWGEPLSQTSQSFMPELIYGVNRSLSKARMLLRSLVIIGAILGLLLGIIGTSVPWLFPNIFTPDRMVIQEMHKVLIPYFIALAVTPPTVSLEGTLLAGRDLKFISLSMSGCFCVGSLVLWALSSRYGLLGCWFSLALFQWARFSMALQRLLSPKGILYSEDTEQYKLLKLRTA 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01024 549 Pfam MatE 122 275 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gma11g01024 549 TIGRFAM matE: MATE efflux family protein 116 508 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gma11g01024 549 PANTHER PROTEIN DETOXIFICATION 46, CHLOROPLASTIC 37 538 - -
Gma11g01024 549 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 37 538 IPR044644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01024 Gma-Chr11 8681422 8686790 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01024 K03327 - gmx:100778295 1055.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01024 11 8681422 8686790 Gma11g01024 11 8681422 8686790 ECH