Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01018 ATGGCCTCTGCATCAGCATCTCTTCTCAAGTCTTCACTTGTTCTTGACAAGTCTGAGTGGGTGAAGGGACAAACACTTCGCCAACCTTCTGCTGCATCAGTTGTGAGATGCAACCCCACCACCCCATCAGGCCTCACCATCAGAGCTGGTTCCTATGCTGATGAGCTCGTTAAGACCGCGAAAACAGTGgcttcaccagggaggggtattttggccatggatgagtccaatgctacctgtgggaagcgtttggcttcaattgggctagagaacactgaagctaaccgccaggcataccgtaccctccttgtgacagttccaggacttggtcagtacatctctggtgccattctctttgaggaaactctctaccaatccacaactgatggcaggaagattgtcgacgtgctcctcgagcaaaacattgttcccggtattaaagTCGACAAGGGTTTGGTACCCCTTGCTGGTTCCAACGACGAGTCATGGTGCCAAGGTCTTGATGGTCTTGCCTCTCGCTCGGCTGCATACTACCAGCAAGGTGCCCGTTTCGCCAAATGGCGTACTGTTGTGAGCATCCCCAACGGTCCCTCTGCTCTGGCAGTTAAGGAAGCTGCCTGGGGTCTGGCTCGCTATGCAGCAATTGCTCAGGACAATGGATTGGTCCCAATTGTGGAACCAGAGATCTTGCTTGATGGGGAGCATGGTATTGACAGAACTTTTGAAGTAGCAAAAAAGGTCTGGGCAGAGGTTTTCTTCTACCTTGCTGAGAACAATGTCCTTTTTGAGGGTATTCTTCTTAAGCCTAGCATGGTTACACCTGGAGCTGAGTCCAAGGACAAGGCCAGTCCTCAGACAGTTGCTGATTACACCCTCAAGCTCCTTCACAGGAGAATTCCCCCTGCTGTCCCTGGAATTATGTTTTTGTCTGGTGGACAGTCTGAGGTTGAAGCTACCCTCAACTTGAATGCCATGAACCAATCTCCAAACCCGTGGCACGTGTCGTTCTCGTATGCCAGAGCCCTCCAAAACACTGCCTTGAAGACATGGGGAGGCCGCCCAGAGAACGTGAAGGCGGCACAAGATGCACTCCTTTTCCGTGCCAAGTCCAACTCGCTCGCCCAGCTTGGGAAGTACACCGGTGAGGGTGAATCCGAGGAAGCCAAGAAGGAGTTGTTCGTCAAAGGCTACTCCTACTAA 1200 0.4108 MASASASLLKSSLVLDKSEWVKGQTLRQPSAASVVRCNPTTPSGLTIRAGSYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTVPGLGQYISGAILFEETLYQSTTDGRKIVDVLLEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRSAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAIAQDNGLVPIVEPEILLDGEHGIDRTFEVAKKVWAEVFFYLAENNVLFEGILLKPSMVTPGAESKDKASPQTVADYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQSPNPWHVSFSYARALQNTALKTWGGRPENVKAAQDALLFRAKSNSLAQLGKYTGEGESEEAKKELFVKGYSY 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01018 399 Gene3D Aldolase class I 37 398 IPR013785 -
Gma11g01018 399 Pfam Fructose-bisphosphate aldolase class-I 55 399 IPR000741 GO:0004332|GO:0006096
Gma11g01018 399 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 27 399 IPR000741 GO:0004332|GO:0006096
Gma11g01018 399 CDD FBP_aldolase_I_a 53 379 - -
Gma11g01018 399 ProSitePatterns Fructose-bisphosphate aldolase class-I active site. 260 270 IPR029768 -
Gma11g01018 399 SUPERFAMILY Aldolase 46 399 - -
Gma11g01018 399 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 27 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01018 Gma-Chr11 8628322 8631571 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01018 52 399 Miscellaneous Gene Families AT3G52930 55.966 1.13e-135 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01018 K01623 - gmx:100818915 777.319
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01018 11 8628322 8631571 Gma11g01018 11 8628322 8631571 ECH
Gma11g01018 11 8628322 8631571 Gma12g00332 12 2753134 2755577 ECH