Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01010 ATGGGAATTGTTGGCTTTGAAATTAATGCGAAttctgcttctgcttctgcttctgcttTGCATTATTATGGTGCTAATTCGTTCTCTTCCCACACGGTTCCTTTTTCTCTGAGACCCTTTTTCGGGAATGCTCTGAACGTGAACACGAGGGTTGCAGGGAAGATTCGGGCCTCTCATGCTCGAAAGCCCAAATTCGGAGCAGTTATTGTTGCTTCACTGAGTGGTGGCTCTAATAATGCTGGGTTGATTAGTGACGCTGTTCTTCCCAAAGACTCAGAATTTAAGCCATCCTTCGACGAATATTTGAAGGCCATGTCTGTCAGAACTGTAAGGGTCAAGAAGCGTGCTGCCACTACTCAAAAACACAAGAAGACGGAAAACGGTGATAATAATAAAATTGATAGAGAAGATGAAGTTGGTGTGTACAAAGAAGGTTGCTCCACCAGAAGTAATAATAATGGTAAGGTCAGAAGAACAGCAACTAAAGGATTCACAAGTGAAAATGATGGCAACCTTGATGATGTAAAGGCAAAGCAGAAGAAAAGTGGAGCAAATGTAAGACAAAATGGGCCGTTGAAACGCCGAAGTCGGAGTTTAGAGCCAGAATCATATGATGGCAGTGAGATTGGCAAAAGTGGAAGTGGAAGGATGAGCAAGAGCATAGTTAGGTCTAGTTTGAATGGTAGCCATGGGAGTGTCAGAGAGAGAGGAGTGACTCATGATTTGTATTCTTCAAAGATGTTGGGAGAAAAGATTGTTAGTAACAGACAAAGGGATTACAATACACAGGGTAAACCCCCCCCTGGTGGAAATAAAATTGTTGCTAGGCAACAACAAGTTCAGGATAGAGGGCTTGATAGAAAAAGACATACTGAAAATGGAAGTTTGGCTTATAGAAATGGAAGCCGTAAGCGTTTCATTGATAGGGGTTATGATTCTGACAATTTGGAGGTCGAACGAGCAGCATTTGAGAATCTTGAGGACCCAAACAATGTTATCAGAAAGTCACAGTTTTCACATAAGGAAATGGAGGAGAAAATCCAAAAGCTAGCCAATTCGTTAAATGGTGCAGATATCAATTTACCTGAATGGATGTTTTCTAAGATGATCAGAAGTGCAAGGCTTAAATTTAATGACTATGCCATAACAAGGATTATCATAATCTTGGGAAAACTAGGAAACTGGCGGCGAGTGATACAAGTGATTGAATGGCTTCAAAAGCGTGAACGTTTCAAGTCCCATAAACTAAGGCATATATATACCGCTGCTCTTGATGCACTTGGAAAGTCGAGGAGACCTGTAGAGGCACTAAATATATTTCATGCAATGCAGCAACAAATGTCCTCATATCCTGATTTAGTAGCTTATCATAGTATTGCTGTGACTCTTGGGCAAGCAGGGCACATGAAGGAACTTTTTGATGTGATTGATATTATGCGATCACCACCCAAGAAGAAGTTCAAAACAGGGATATTTGAGAACTGGGACCCAAGGCTGGAACCGGATATTGTAGTCTATCATGCTGTCCTTAATGCTTGTGTTAGGCGGAAACAATGGGAAGGAGCCTTTTGGGTTTTGCAGCAGTTAAAGAAGCAAGGACAGCCGCCTTCTGCCACAACTTACGGCCTAGTTATGGAGGTGATGCTTTCATGTGGCAAGTATAACTTGGTTCATGAATTTTTCAGAAAACTTCAGAAGTCTTTCAGTCCCAATTCATTGACATATAGAGTTCTTGTAAATACACTTTGGCAAGAGGGAAAACCTGATGAGGCTATACTGGCTGTCCAAGAAATGGAAAGACGTGGAATTGTAGGTTCTGCTTCTCTTTATTATGATCTAGCTCGATGCCTCAGTGCAGCTGGAAGAAGTCATGAGGCACTAAAGCAGATAGACAAGATATGTAAAGTTGCAAATAAACCACTGGTAGTGACCTACACTGGCTTGATGCAAGCAAGTCTAGACGCTGGAAACATTCAAGATGGGGCTTATATTTTTGAGAAAATGAAGGAAATTTGTGCTCCAAATCTGGTTACTTGTAACATAATTCTGAAAGCTTACTTGGAACATGGCATGTTTCAAGAAGCTAAAGTGTTGTTTGAGCAGATGTCAGAAAATGCAAATCGTCTGAGGGGAAATACTGATTACAAAATGCTGGTGGTACCAGATACATACTCATTCAACACCATGCTAGATGCATGTGTTGCAGAGAAGAGATGGGATTATTTTGATCATGTGTATCAAAGGATGCTGTACCATGGTTATCACTTCAATCCAAAACGTCATCTTCGAATGATATTGGAGGCTTCAAAAGCTGGAAAGGAACGGCCTTTGGAGATAACATGGAAGCACTTAACCGATACAGATCGTATTCCACCTGCTCCTCTGATCAAGGAGAGGTTCTGTGCAAAGCTTGAGAAAGATGACTATGTTGCTGCTCTCACATGTATCATCAACAATCCCCCAAAAGACTTGCAGCCATTTTCCAAATCGTCTTGGTTGAAACTATTCAAAGAAAATTCTCAGCGATTTCAGAAGGATACGATTGTTGGACTAATGAACGAGGCCAGCAATATAGTTTCCAATAATAGTTTTCCAAATCCAACACTTGAGTATTTAATTCAATCATGCAAAGAATTTCTTTTTGCTACTGTCCTCAGTACAGCTGACATGGATTCAGTAAAAATGTAG 2688 0.404 MGIVGFEINANSASASASALHYYGANSFSSHTVPFSLRPFFGNALNVNTRVAGKIRASHARKPKFGAVIVASLSGGSNNAGLISDAVLPKDSEFKPSFDEYLKAMSVRTVRVKKRAATTQKHKKTENGDNNKIDREDEVGVYKEGCSTRSNNNGKVRRTATKGFTSENDGNLDDVKAKQKKSGANVRQNGPLKRRSRSLEPESYDGSEIGKSGSGRMSKSIVRSSLNGSHGSVRERGVTHDLYSSKMLGEKIVSNRQRDYNTQGKPPPGGNKIVARQQQVQDRGLDRKRHTENGSLAYRNGSRKRFIDRGYDSDNLEVERAAFENLEDPNNVIRKSQFSHKEMEEKIQKLANSLNGADINLPEWMFSKMIRSARLKFNDYAITRIIIILGKLGNWRRVIQVIEWLQKRERFKSHKLRHIYTAALDALGKSRRPVEALNIFHAMQQQMSSYPDLVAYHSIAVTLGQAGHMKELFDVIDIMRSPPKKKFKTGIFENWDPRLEPDIVVYHAVLNACVRRKQWEGAFWVLQQLKKQGQPPSATTYGLVMEVMLSCGKYNLVHEFFRKLQKSFSPNSLTYRVLVNTLWQEGKPDEAILAVQEMERRGIVGSASLYYDLARCLSAAGRSHEALKQIDKICKVANKPLVVTYTGLMQASLDAGNIQDGAYIFEKMKEICAPNLVTCNIILKAYLEHGMFQEAKVLFEQMSENANRLRGNTDYKMLVVPDTYSFNTMLDACVAEKRWDYFDHVYQRMLYHGYHFNPKRHLRMILEASKAGKERPLEITWKHLTDTDRIPPAPLIKERFCAKLEKDDYVAALTCIINNPPKDLQPFSKSSWLKLFKENSQRFQKDTIVGLMNEASNIVSNNSFPNPTLEYLIQSCKEFLFATVLSTADMDSVKM 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01010 895 MobiDBLite consensus disorder prediction 149 168 - -
Gma11g01010 895 Gene3D Tetratricopeptide repeat domain 341 490 IPR011990 GO:0005515
Gma11g01010 895 Gene3D Tetratricopeptide repeat domain 491 587 IPR011990 GO:0005515
Gma11g01010 895 Pfam Pentatricopeptide repeat domain 499 547 IPR002885 -
Gma11g01010 895 Pfam Pentatricopeptide repeat domain 640 686 IPR002885 -
Gma11g01010 895 SUPERFAMILY TPR-like 487 704 IPR011990 GO:0005515
Gma11g01010 895 Pfam PPR repeat 724 753 IPR002885 -
Gma11g01010 895 Pfam PPR repeat 574 603 IPR002885 -
Gma11g01010 895 Pfam PPR repeat 419 445 IPR002885 -
Gma11g01010 895 MobiDBLite consensus disorder prediction 121 136 - -
Gma11g01010 895 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 722 756 IPR002885 -
Gma11g01010 895 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 675 709 IPR002885 -
Gma11g01010 895 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 571 605 IPR002885 -
Gma11g01010 895 TIGRFAM PPR: pentatricopeptide repeat domain 677 705 IPR002885 -
Gma11g01010 895 TIGRFAM PPR: pentatricopeptide repeat domain 724 750 IPR002885 -
Gma11g01010 895 TIGRFAM PPR: pentatricopeptide repeat domain 419 452 IPR002885 -
Gma11g01010 895 MobiDBLite consensus disorder prediction 113 136 - -
Gma11g01010 895 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 502 536 IPR002885 -
Gma11g01010 895 PANTHER OS01G0674700 PROTEIN 11 885 - -
Gma11g01010 895 PANTHER OS01G0674700 PROTEIN 11 885 IPR044645 GO:0009658
Gma11g01010 895 Gene3D Tetratricopeptide repeat domain 606 785 IPR011990 GO:0005515
Gma11g01010 895 Coils Coil 340 360 - -
Gma11g01010 895 MobiDBLite consensus disorder prediction 213 232 - -
Gma11g01010 895 MobiDBLite consensus disorder prediction 149 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01010 Gma-Chr11 8562948 8570949 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01010 504 772 Miscellaneous Gene Families AT4G11690 20.678 7.78e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01010 - - gmx:100787028 1780.38