Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00982 ATGGCATCCAAGAGAATACTGAAGGAGCTCAAGGACTTACAGAGAGATCCACCAACTTCATGCAGTGCAGgccctgtgggcgaggacatgttccattggcaagcaaccatcattggtccaaatgacagtccctatgctggtggtgttttccttgtgaccatccatttccctcccgattatcccttcaaacctcccaaggtagcattcaggaccaaggtgttccatcccaacattaacagcaatggcaatatttgcctggacatactcaaagaacaatggagtcctgctctcaccatatccaagGTGCTGCTCTCTATATGTTCTCTGCTAACGGATCCAAATCCTGATGACCCTTTAGTGCCTGAAATTGCTCATTTGTGCAAGACCGACAAATTCAAGTATGAGTCTACTGCTAGAAGCTGGACCCAGAACTTGGTGTTTGAAACCTGTCATCCGCTTGTTGATCACAAATGA 474 0.2278 MASKRILKELKDLQRDPPTSCSAGPVGEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHLCKTDKFKYESTARSWTQNLVFETCHPLVDHK 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00982 157 SUPERFAMILY UBC-like 2 145 IPR016135 -
Gma11g00982 157 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 3 149 - -
Gma11g00982 157 SMART ubc_7 4 147 - -
Gma11g00982 157 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 1 147 IPR000608 -
Gma11g00982 157 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 74 89 IPR023313 -
Gma11g00982 157 PANTHER BNAA01G32320D PROTEIN 3 149 - -
Gma11g00982 157 Pfam Ubiquitin-conjugating enzyme 5 141 IPR000608 -
Gma11g00982 157 Gene3D Ubiquitin Conjugating Enzyme 1 144 IPR016135 -
Gma11g00982 157 CDD UBCc 3 142 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00982 Gma-Chr11 8353764 8355474 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00982 2 114 Miscellaneous Gene Families AT3G17000 36.975 3.24e-20 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00982 - K06689 gmx:100805577 304.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00309 12 2508236 2509933 Gma11g00982 11 8353764 8355474 GST