Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00962 ATGATTCTGCAACCAATAAGATTGGCATCCCATGCATCACTCGGCCTTTTGCTCAATGACAATCCTTGTCCATCTACCAGCAGCTTGTGTTGGGGACAAAGGGTGATTGACATTCGGGTGCAGGAGGATCGCAAAGTGTGCCACGGAGTCCTCGTTACATACAGCATCGATGTTGTCATCAAAGATGTCAAGAAGTTCTTATCAGAAACTCAGTCCGAGATCATCATCCTCGAGGTTAGAACCGAGTTTGGGCACGAGGATCCTCCGGAATTCAACAAGTACCTTGAGGAACAACTGGGGGATTACCTAGTTCCCCATGATGAAAATGTTTTTGAAAAGACCATCGCAGAAGTGCTACCAAAGAGAGTTATATGTGTTTGGAAGCCAATAAAATCACCACAGCCTAAGACAGGGAGTCCTCTGTGGAGTGCAGGGTACTTGAGGGATAATTGGATCAACACTGATTTGCCATCAACCAAGTTTGAGAGCAACATGAAGCATTTGAGTGAGCAGCAACCTGTTACTTCCAGAAAATACTTTTACAGGGTGGAGAACATCGTTACGCCTGTGGCGGATAACCCTGTTCTGTGTGTGAAGCCTGTCACTGAGCGAACTCATGGCTTTGCAAGACTCTTCATGAGTCAGTGCTTCTCCAAAGGTGAAGAAATGCATATTTTAAAAgttcggcaagttatcatAGGACAACAAGCTGGTTGGAGTAGACATGGGACCATTAAAGGTAACGGGGATGTTGCATTCCATCTGGAGTTAAATATGACGAGCTGGGGAATTTGCTGTAGGGATGATTCGGGTTGCATCCTAAGGGCTCCAGATTTTTCTGAACTTCCCTCCATCATTAGAGAGTCTAAATATATACTCTCCCTTAATCCAAACTATTATGTAGAGCTTGTCAATGCCCTTCCCATGGTAGCAACATGA 939 0.4409 MILQPIRLASHASLGLLLNDNPCPSTSSLCWGQRVIDIRVQEDRKVCHGVLVTYSIDVVIKDVKKFLSETQSEIIILEVRTEFGHEDPPEFNKYLEEQLGDYLVPHDENVFEKTIAEVLPKRVICVWKPIKSPQPKTGSPLWSAGYLRDNWINTDLPSTKFESNMKHLSEQQPVTSRKYFYRVENIVTPVADNPVLCVKPVTERTHGFARLFMSQCFSKGEEMHILKVRQVIIGQQAGWSRHGTIKGNGDVAFHLELNMTSWGICCRDDSGCILRAPDFSELPSIIRESKYILSLNPNYYVELVNALPMVAT 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00962 312 Gene3D Phosphatidylinositol (PI) phosphodiesterase 24 219 IPR017946 GO:0006629|GO:0008081
Gma11g00962 312 PANTHER 1-PHOSPHATIDYLINOSITOL PHOSPHODIESTERASE-LIKE PROTEIN 23 221 - -
Gma11g00962 312 PANTHER UNCHARACTERIZED 23 221 - -
Gma11g00962 312 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 29 120 - -
Gma11g00962 312 SUPERFAMILY PLC-like phosphodiesterases 24 215 IPR017946 GO:0006629|GO:0008081
Gma11g00962 312 Pfam Phosphatidylinositol-specific phospholipase C, X domain 28 110 IPR000909 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00962 Gma-Chr11 8151222 8155611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00962 27 220 Acyl Lipid Metabolism Gene Families AT4G38690 71.649 1.94e-106 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00962 - - gsj:114376954 455.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00290 12 2299452 2302178 Gma11g00962 11 8151222 8155611 GST