Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00872 ATGTTTCTTAAAAAAAGCACTGCAATGTCTTCCATATTGCTGCTAGTTGGAATGTTATCGTCCATTACAGTTGCACAATCCATAGGAGTTTGCTATGGAGTACTCGGTAATAATCTACCATCAAGGCAAGAAGTTGTGGACTTGTATAAAACAAATGGGATAGGTAGAATGCGTATATACTATCCAGATGAAGAAGCACTCCAAGCCCTTAGAGGTTCAGGCATTGAGTTGATTATGGACGTGGCTAAGGAAACCCTTCAATCAATGACAGACCCCAATGCTGCTACAGATTGGGTCAATAAGTATGTTACAGCCTACTCGCAAGACGTCAATTTCAAGTACATCGCTGTTGGAAATGAAATTCACCCCAATACCAATGAGGCACAGTACATTCTATCTGCCATGACCAACATTCAGAATGCAATTTCATCAGCCAATTTACAAATCAAGGTGTCAACAGCAATAGACTCTACTTTCATTGCTCCGCCCTCCTATCCACCCAATGATGCTGTTTTCACTAGCGATGCAGAGCCATATGTAAAACCCATAATAGACTTCCTAGTGAGAAATGAGGCGCCACTTCTTGCCAATGTGTACCCTTACTTTGCTTATGCGAATGATCAACAAAACAGTATTCCTCTTGCCTATGCTCTTTTTACCCAACAAGGAAACAACGACGCTGGGTACCAAAACCTCTTCGATGCTATGTTGGATTCAATATACGCTGCAGTGGAGAAAGTGGGAGCATCCAATTTGCAGATAGTGGTTTCTGAGAGTGGGTGGCCATCTGAAGGTGGTGGAACTGGAGCATCAATCGATAATGCAGGCACTTACAATGCTAATTTGATTAGTCATGCCTCGGGTGGGAGTGGAACTCCAAAGAGGCCTGGTGGGTCTATAGAGACTTACTTGTTTGCCATGTTTGACGAAAACCAGAAGCAAGATGCTGAAACTGAGCGTCATTTTGGTCTCTTCAGGCCTGATAAATCACCCAAATACCAACTCAATTTCAATTAA 1017 0.4258 MFLKKSTAMSSILLLVGMLSSITVAQSIGVCYGVLGNNLPSRQEVVDLYKTNGIGRMRIYYPDEEALQALRGSGIELIMDVAKETLQSMTDPNAATDWVNKYVTAYSQDVNFKYIAVGNEIHPNTNEAQYILSAMTNIQNAISSANLQIKVSTAIDSTFIAPPSYPPNDAVFTSDAEPYVKPIIDFLVRNEAPLLANVYPYFAYANDQQNSIPLAYALFTQQGNNDAGYQNLFDAMLDSIYAAVEKVGASNLQIVVSESGWPSEGGGTGASIDNAGTYNANLISHASGGSGTPKRPGGSIETYLFAMFDENQKQDAETERHFGLFRPDKSPKYQLNFN 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00872 338 SUPERFAMILY (Trans)glycosidases 28 336 IPR017853 -
Gma11g00872 338 Pfam Glycosyl hydrolases family 17 28 337 IPR000490 GO:0004553|GO:0005975
Gma11g00872 338 ProSitePatterns Glycosyl hydrolases family 17 signature. 252 265 IPR000490 GO:0004553|GO:0005975
Gma11g00872 338 Gene3D Glycosidases 26 338 - -
Gma11g00872 338 PANTHER GLYCOSIDE HYDROLASE FAMILY 17 PROTEIN 20 335 - -
Gma11g00872 338 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 20 335 IPR044965 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00872 Gma-Chr11 7321180 7324295 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00872 3 338 Glycoside Hydrolase AT3G57260 48.703 1.97e-101 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00872 - - gmx:100811427 674.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00872 11 7321180 7324295 Gma11g00872 11 7321180 7324295 ECH