Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00831 ATGAGAGGAAGTCTTTACAATAGTGTTCCAAAGAAAGCATTGTATTACTTCAAAAGGAAGACTTCTTCTGAAGAAACAGCAGATCATGTCAGTCTATCTTGCGCCATTTCAGCATCTACAAGTTTGGGAGAGCTGGCTTTTGGTCAGTCCATTCATGGGCTGGGAATCAAGCTAGGCTACAAGTCACATATTTCAGTTGCCAACTCTCTCATTTCATTATATTCACAATGTGAATACCTCAAGGCTGCTGAAACAGTATTCAGAGAAATAGCACTTAAAGATATTGTTTCCTGGAATGCAATGATGGAAGGATTTGCTTCAAATGGAAAGGTTAATGAAGTGTTTGATCCTCTGGTTCAAAAGCAAAAGGTAGGGTTTTTCCAGCCTGATATAGTGACATTAACTACCATACTTCCACTTTGTGCAGAAATGATGCATCCCAGAGAAGGAAGAACTATCCATAGATTCGCAATTCGAAGACAGATGGTATTTGATCATGTTATGTTACTGAATAGCCAGATAGAAATGTATTCAAAGTGCAACCTTGTGGAGAAAGCAGAGCTCTTGTTCAATTCTACCACTGAGAAAGACTCGGTCTCATGGAATGCAATGATATCTGGCTATTCCCATAACAGAGAGGCTCTAGAGACTTTCAAGTTGATGAGACGGGAACCTCCTCTAAACTATGACTCTATAACCCTTGTTAGTGTCTTGTCTGCCTGTGCAAACCTGGAACTATTCAACCTAGGAAAGTCTCTCCACGGCCTTGCACTTAAGTCTCCTTTGGGATCAGAACTCGTTAATTACAATGACACTGCCCTCCATGTATTCAGACATGCCAAGGAGAAGTCAGAATCAGCTTGGAATTCTATGATTTCTGCATATGGATACCATGGAAAGGGTGAGAAAGCAATCAAACTCTTCCATGAAATGTGTGAGTCAGGAGCAATGGTGAGCAAAAGCACTTTTGTTAGCCTTTTATCAGCATGCAGCCATTCAGGACTTGTGAACCAAGGAAAATCAGGTAGATTGGATGAGGCTTATGAGTTTGCTAAGGGGTGTGACAGCGCAGGTGTATGGGGAACTCTCCTAAGTGCATGCAACTACCATCTCAAGTTAGGGAAACAAATTGCTCAACGTCTCTTTCAACTTGAACCTCAAAATGTTGGATATTACATATCATTGTCAAATATGTATGTTGCTGCAGGAAGTTGGAAAGATGCTACCGAGTTGAGACAATCTATCCAGGACTTGGGTTTAAGAAAAACCGCAGGTTATAGCCTTGTAGAGATGTTGGTTTGTGATTAA 1308 0.409 MRGSLYNSVPKKALYYFKRKTSSEETADHVSLSCAISASTSLGELAFGQSIHGLGIKLGYKSHISVANSLISLYSQCEYLKAAETVFREIALKDIVSWNAMMEGFASNGKVNEVFDPLVQKQKVGFFQPDIVTLTTILPLCAEMMHPREGRTIHRFAIRRQMVFDHVMLLNSQIEMYSKCNLVEKAELLFNSTTEKDSVSWNAMISGYSHNREALETFKLMRREPPLNYDSITLVSVLSACANLELFNLGKSLHGLALKSPLGSELVNYNDTALHVFRHAKEKSESAWNSMISAYGYHGKGEKAIKLFHEMCESGAMVSKSTFVSLLSACSHSGLVNQGKSGRLDEAYEFAKGCDSAGVWGTLLSACNYHLKLGKQIAQRLFQLEPQNVGYYISLSNMYVAAGSWKDATELRQSIQDLGLRKTAGYSLVEMLVCD 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00831 435 Pfam PPR repeat family 286 331 IPR002885 -
Gma11g00831 435 Gene3D Tetratricopeptide repeat domain 117 260 IPR011990 GO:0005515
Gma11g00831 435 Gene3D Tetratricopeptide repeat domain 5 116 IPR011990 GO:0005515
Gma11g00831 435 PANTHER BNACNNG07920D PROTEIN 3 255 - -
Gma11g00831 435 PANTHER BNACNNG07920D PROTEIN 339 431 - -
Gma11g00831 435 PANTHER BNACNNG07920D PROTEIN 118 340 - -
Gma11g00831 435 Gene3D Tetratricopeptide repeat domain 265 432 IPR011990 GO:0005515
Gma11g00831 435 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 284 318 IPR002885 -
Gma11g00831 435 TIGRFAM PPR: pentatricopeptide repeat domain 287 315 IPR002885 -
Gma11g00831 435 Pfam PPR repeat 199 222 IPR002885 -
Gma11g00831 435 Pfam PPR repeat 96 115 IPR002885 -
Gma11g00831 435 Pfam PPR repeat 68 90 IPR002885 -
Gma11g00831 435 Pfam E motif 372 430 IPR046848 -
Gma11g00831 435 PANTHER - 3 255 - -
Gma11g00831 435 PANTHER - 339 431 - -
Gma11g00831 435 PANTHER - 118 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00831 Gma-Chr11 6987671 6989980 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00831 10 431 Glycoside Hydrolase AT3G49170 27.696 5.51e-56 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00831 - - gmx:100775736 389.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01577 01 51358099 51360933 Gma11g00831 11 6987671 6989980 GST