Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00806 ATGGAAGTTCGCCGGCGAGTCCTCCGTCCCGCTCCCGCCGGCGAACCTTTGAAGCCCAAACAGGACCCTAACTCCCAACAGCAGCAGCAGCCACAGCAATCGTACCTcaccaacgccgtgttcttcgggctgttcttctcggtggcgtacttcctcctccaccgatggcgcgagaagatccgcacctccactccccttcacgtcgtcacgctctccgagatggccgccatcgtctccctcatcgcctccgtcgtctacctcatggccttcttcggcattaccttcatCCTCCACCCATTCCTTAATTCCCGTTCTTCTCCTGACGATGACATCGACCTCGACATTCCCAAATTACCTGTCCCCACTCCCTGCCCCGCTGCCCTTCCTCCAAAACTCCCTCCTCCCCCACTCCCTCACCACGACGAGGACATCGTCCTCGCCGTCGTGTCCGGCTCCATCCCCTCCTACTCGCTGGAATCGCGGCTCGGCGATTCCCACCGAGCCGCGTCAATTCGGCGCGAGGCGGTGGAGCGTATCACCGGGAGGTCTATCCAAGGCCTCCCCGTGGAAGGCTTTGATTATGACTCCATTCTAGGGCAGTGCTGTGAGATGCCGATTGGGTTCGTGCAGATCCCGGTCGGCGTCGCGGGTCCCTTGCTTCTCGACGGAAAGGAGTACACTGTTCCAATGGCCACCACGGAAGGTTGCTTGGTCGCTAGCACCAACAGAGGCTGCAAGGCCATTCATGTTTCTGGCGGAGCTTCCTCCATGCTCCTCCGTGATGCCATGACCAGAGCCCCCGTGGTTAGGTTCAACTCTGCAAAACGTGCTTCTCAGCTTAAGTTCTACCTCGAAGACCCTCTTAATTTCGATTCCCTTGCCGTCGTTTTCAACAAGTCAAGCAGGTTTGCGAGATTGCAAGATATTAAGGCTGCAATAGCAGGGAAGAATTTGTACATTAGATTCAGTTGCACTACCGGGGATGCCATGGGGATGAACATGGTCTCCAAAGGAGTCCAAAACGTGCTTACTTTTCTCCAGAGTGATTTTCCAGATATGGATGTTATTGGGATATCTGGGAATTTCTGTTCGGATAAGAAGGCTGCGGCGGTGAACTGGATTGAGGGGAGAGGGAAATCGGTGGTGTGCGAGGCTGTAATTAAGGAGGAGGTGGTTAAGAAAGTGTTGAAGACCAGCGTGGAGGCTTTGGTTGAGCTTAACATGTTGAAAAACCTTACTGGGTCTGCTATGGCTGGTGCTCTTGGTGGCTTCAATGCTCATGCTAGTAACATTGTTTCTGCTGTTTACTTGGCCACTGGACAGGACCCTGCTCAGAATGTGGAGAGTTCTCACTGCATAACTATGATGGAAGCTGTGAATGATGGCAAGGACCTTCACATCTCTGTTACTATGCCTTCCATTGAGGTGGGTACAGTTGGAGGGGGCACACAACTTGCGTCTCAGTCAGCATGCCTTAATTTATTAGGAGTAAAGGGTGCGAGCAAAGAGTCCCCAGGTGCAAATTCTAGGTTACTAGCAACCATAGTAGCAGGTTCAGTCCTAGCAGGGGAACTCTCACTCatgtctgcaattgcagcaggccaacttgttaatagccacatgaaatacaacagatctagcaaggatatcaccaaaatTGCCTCCTAG 1668 0.449 MEVRRRVLRPAPAGEPLKPKQDPNSQQQQQPQQSYLTNAVFFGLFFSVAYFLLHRWREKIRTSTPLHVVTLSEMAAIVSLIASVVYLMAFFGITFILHPFLNSRSSPDDDIDLDIPKLPVPTPCPAALPPKLPPPPLPHHDEDIVLAVVSGSIPSYSLESRLGDSHRAASIRREAVERITGRSIQGLPVEGFDYDSILGQCCEMPIGFVQIPVGVAGPLLLDGKEYTVPMATTEGCLVASTNRGCKAIHVSGGASSMLLRDAMTRAPVVRFNSAKRASQLKFYLEDPLNFDSLAVVFNKSSRFARLQDIKAAIAGKNLYIRFSCTTGDAMGMNMVSKGVQNVLTFLQSDFPDMDVIGISGNFCSDKKAAAVNWIEGRGKSVVCEAVIKEEVVKKVLKTSVEALVELNMLKNLTGSAMAGALGGFNAHASNIVSAVYLATGQDPAQNVESSHCITMMEAVNDGKDLHISVTMPSIEVGTVGGGTQLASQSACLNLLGVKGASKESPGANSRLLATIVAGSVLAGELSLMSAIAAGQLVNSHMKYNRSSKDITKIAS 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00806 555 ProSitePatterns Hydroxymethylglutaryl-coenzyme A reductases signature 1. 321 335 IPR023076 GO:0004420
Gma11g00806 555 ProSiteProfiles Hydroxymethylglutaryl-coenzyme A reductases family profile. 141 545 IPR002202 GO:0004420|GO:0015936
Gma11g00806 555 MobiDBLite consensus disorder prediction 1 30 - -
Gma11g00806 555 Gene3D - 212 540 IPR023074 GO:0004420
Gma11g00806 555 SUPERFAMILY NAD-binding domain of HMG-CoA reductase 263 378 IPR009023 -
Gma11g00806 555 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 201 222 IPR002202 GO:0004420|GO:0015936
Gma11g00806 555 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 228 248 IPR002202 GO:0004420|GO:0015936
Gma11g00806 555 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 319 337 IPR002202 GO:0004420|GO:0015936
Gma11g00806 555 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 359 384 IPR002202 GO:0004420|GO:0015936
Gma11g00806 555 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 410 436 IPR002202 GO:0004420|GO:0015936
Gma11g00806 555 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 464 485 IPR002202 GO:0004420|GO:0015936
Gma11g00806 555 PANTHER 3-HYDROXY-3-METHYLGLUTARYL COENZYME A REDUCTASE 24 128 - -
Gma11g00806 555 PANTHER 3-HYDROXY-3-METHYLGLUTARYL COENZYME A REDUCTASE 133 554 - -
Gma11g00806 555 CDD HMG-CoA_reductase_classI 142 545 IPR004554 GO:0004420|GO:0005515|GO:0008299
Gma11g00806 555 Pfam Hydroxymethylglutaryl-coenzyme A reductase 169 545 IPR002202 GO:0004420|GO:0015936
Gma11g00806 555 Gene3D - 262 378 IPR009023 -
Gma11g00806 555 SUPERFAMILY Substrate-binding domain of HMG-CoA reductase 138 534 IPR009029 GO:0015936|GO:0016616
Gma11g00806 555 TIGRFAM HMG_CoA_R_NADP: hydroxymethylglutaryl-CoA reductase (NADPH) 142 545 IPR004554 GO:0004420|GO:0005515|GO:0008299
Gma11g00806 555 ProSitePatterns Hydroxymethylglutaryl-coenzyme A reductases signature 2. 476 483 IPR023076 GO:0004420
Gma11g00806 555 Gene3D - 138 211 IPR023282 GO:0004420
Gma11g00806 555 ProSitePatterns Hydroxymethylglutaryl-coenzyme A reductases signature 3. 530 543 IPR023076 GO:0004420
Gma11g00806 555 PANTHER 3-HYDROXY-3-METHYLGLUTARYL-COENZYME A REDUCTASE 24 128 IPR002202 GO:0004420|GO:0015936
Gma11g00806 555 PANTHER 3-HYDROXY-3-METHYLGLUTARYL-COENZYME A REDUCTASE 133 554 IPR002202 GO:0004420|GO:0015936
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00806 Gma-Chr11 6749576 6753365 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00806 4 551 Lipid Metabolism Gene Families AT1G76490 72.500 0.0 813
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00806 K00021 - gmx:100790033 978.008
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00806 11 6749576 6753365 Gma01g01604 01 51677026 51681477 ECH
Gma11g00806 11 6749576 6753365 Gma11g00806 11 6749576 6753365 ECH
Gma01g01604 01 51677026 51681477 Gma11g00806 11 6749576 6753365 GST