Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00778 ATGATGGAGAAGGAAGACTCTGTGCAGAAGCTGTACACGCGTATGCGACTCTGGGAATTTCCGGATCAGTATGTGATTGAGCCAACGGATGGATCTTCTGGTTCTTCTTTGTCTGTTAGTCGTGTCGATGGATCCATGAAGCTCATTGATAAGGTTCCAGAATGCAGCACGCTTCGAGTTCCTAAGATTTATACGATTTTCGGTGTTGTTGGGATGTTGAAGCTCTTGGCTGGATCATATCTGCTGGTTATAACTGAGCGTGAATCTGTTGGATCTTACTCGGGGCATCCAATTTTCAAAATTTCTAAATTGAAGGTTTTTCCATGCGACAATTCTCTTAAAAATACCCCTCCTGAAAAGAAGAAAATAGAGATGGAATTTtcaggtctgcttaatgttgctgagaaaacttctggcctgttcttctcatatgaaactaatttaactctgagtgcacaacggttgaatgacctgggtgatgagtctagattgcttcctctttggagacagGCAGAGCCTCGATTCCTATGGAACAATTATATGTTAGAAGTGCTTATAGATAACAAGCTTGAACCATACTTGCTCCCTGTAGTTCAAGGCAGCTTTCATCACTTTCAAGCAGCCATTGGGAAAGATATTATTGATGTCAGTTTGATTGCCAGGAGATGCACAAGAAGAAATGGAACTCGGATGTGGAGAAGAGGAGCTGATCCTGATGGCTATGTTGCCAATTTTGTGGAAACAGAACAAATTATGCAGTTTAATGGGTATACTGCTTCATTTGTTCAGGTCCGTGGTTCTATCCCACTCCTCTGGCAGCAAATTGTTGACTTAACTTATAAACCAAAGTTTGAGTTATTGAAACTTGAGGAAGCTCCACGAGTCCTAGAGAGGCATTTCTTAGATTTAAGGAAAAAATATGGGGCAGTATTGGCTGTTGATCTTGTTAACAAGCATGGCGGAGAAGGGCGACTGTGTGAAAAATTTGGTGATGCATCGCAGCATGTGGCTGGTAATGATGTAAGATATCTGCACTTTGATTTTCACCATGTCTGTGGGCATGTTCATTTTGATCGTCTCTCAATCCTGTATGATCAAATTTCAGATTTCCTTGAGAGAAATGGATATCTTCTGTTGAATGAAAAAGGAGAGAAAATGAAGGAGCAACTTGGAGTTGTTAGGACCAATTGTATTGATTGTTTAGACCGTACAAATGTAACTCAGAGCATGATAGGCCGAAATATGTTGGAATATCAGCTTAGAAGGCTTGGTGTCTTTGGTGCTGAAGAAACCATTAGTTCACATCCAAATCTGGATGAAAACTTTAAGATCTTGTGGGCTAATCATGGGGATGATATAAGTATTCAATACTCAGGAACTCCTGCTCTTAAAGGAGACTTTGTCAGATTTGGGCACCGCACAATTCAAGGGATACTACAAGATGGTGTCAATGCTCTTCTACGATATTATTTCAATAATTTTGTTGATGGAACGAAGCAGGATGCAATTGATCTCTTGCAAGGACATTATATAGTTTCTGTTGGCCGAGATACAGCTGCCACTTCTCAGAAAGGAGGCCTTGAAGCTATAGCTTCATTTCCTCTGGCTTTGGGTCTGGTTTTGACTGGTTTCCTCTTTGCAACCATGTCACTGAGGCAAGTTCAATATGATTTCCGGCACATCTTCTTTTCGCTAATGTGGGCGGGCATTAGCATCGGCATAGCAGCATTTGTGAGGGCCAATGGCCGTGTTTTCTGCAACAGGCCTCGCCTACACAACCCCCGGTGA 1788 0.3881 MMEKEDSVQKLYTRMRLWEFPDQYVIEPTDGSSGSSLSVSRVDGSMKLIDKVPECSTLRVPKIYTIFGVVGMLKLLAGSYLLVITERESVGSYSGHPIFKISKLKVFPCDNSLKNTPPEKKKIEMEFSGLLNVAEKTSGLFFSYETNLTLSAQRLNDLGDESRLLPLWRQAEPRFLWNNYMLEVLIDNKLEPYLLPVVQGSFHHFQAAIGKDIIDVSLIARRCTRRNGTRMWRRGADPDGYVANFVETEQIMQFNGYTASFVQVRGSIPLLWQQIVDLTYKPKFELLKLEEAPRVLERHFLDLRKKYGAVLAVDLVNKHGGEGRLCEKFGDASQHVAGNDVRYLHFDFHHVCGHVHFDRLSILYDQISDFLERNGYLLLNEKGEKMKEQLGVVRTNCIDCLDRTNVTQSMIGRNMLEYQLRRLGVFGAEETISSHPNLDENFKILWANHGDDISIQYSGTPALKGDFVRFGHRTIQGILQDGVNALLRYYFNNFVDGTKQDAIDLLQGHYIVSVGRDTAATSQKGGLEAIASFPLALGLVLTGFLFATMSLRQVQYDFRHIFFSLMWAGISIGIAAFVRANGRVFCNRPRLHNPR 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00778 595 Pfam SacI homology domain 67 352 IPR002013 GO:0016791
Gma11g00778 595 PANTHER PHOSPHATIDYLINOSITIDE PHOSPHATASE SAC1 10 595 - -
Gma11g00778 595 PANTHER PHOSPHOINOSITIDE PHOSPHATASE SAC6 10 595 IPR030069 GO:0052866
Gma11g00778 595 ProSiteProfiles Sac phosphatase domain profile. 131 459 IPR002013 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00778 Gma-Chr11 6503257 6511835 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00778 2 595 Acyl Lipid Metabolism Gene Families AT3G51460 75.000 0.0 977
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00778 K21797 - gmx:100780963 1193.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00778 11 6503257 6511835 Gma11g00778 11 6503257 6511835 ECH
Gma01g01632 01 52009388 52018992 Gma11g00778 11 6503257 6511835 GST