Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00716 atggcttccactgccaccaatttctctctttctctctgcgccaaccaacaaactccaatccccaaaccctctttcttctccaataacaaccatttgcacttcaactctaataataattgggcctgggcctctgtttccacctctcgcaagtcaaggatatgcgccacctcctctcaagttatggatccctccgcagcaaaatccgaacccgctcttcccaccatcgtcgaagtcgatttgggtagccggagctatcctatttacatcggatccgggttactaaaccaacccgactatctccagaggcatgtgcatggaaagagagtcctagttgtaactaacgaaaccgttgcgccactttatctagacaaggttgttgatgctttgacaaggggaaacccgaatgtttctgtggagagtgtaattttacctgatggtgagcagtacaaggacatggatactcttatgaaagtctttgacaaggccatcgagtcgcggctcgaccggcggtgtacatttgttgctcttggtggtggtgtgattggcgacatgtgtggctttgctgcctctgccttcctacgtggtgttaattttattcagattcctacaactgtgatggcacaggtcgattcttcagttggtggaaaaactgggataaatcaccgccttgggaagaacatgatcggtaccttttaccaacctcagtgtgtgcttatagacacagacacattaaatacgctaccggatagggaactggcatcagggctagcagaggttataaagtatgggctcattagggatgcagagttttttgagtggcaagagaaaaatatgcacttattattggcaagagatcctagtgtaatggcatatgctataaagcgatcttgtgaaaacaaggctgaggttgtgtccttagatgagaaggaaagtggactgagggcaacattgaacttgggtcatacatttggtcatgcaatagaaactggggtaggctatgggcagtggcttcatggagaggctgttgcagctggcacggtaatggctgttgacatgtcatatcgcctaggttggattgatgattctcttgtgaaacgagttggagacattttaaaacaggctaagttacccacagcccctcctgagaccgtgactgtggacatgtttaaatctgtcatggcagtggataagaagCTGGCCAGAAGACCCTTGTTTTTTAGGGAGATCAATCCACAACCAAGGAAACATACTTTGTGGCAGGCAACATCAGACTTTACTGGTGGACAAGCCAGCATAAACAGGCGACATTTTCTGCAGTGTCCGCAAGGATTGCTAGGCAAGCATTTTGAGAAGCTCATTCAGTGTGATCCACGTCTCAACTATCTAAGCCAGCATCCGGATTTGGTGCTGGATTCTCCATATTTTGAACCTGGAACAACTTCAGTTCACGACCACATTGAATCTAGTGATGGTTTTGATAGAAAGAGCGAAGAGCGATCTGGTATTTTTGGATTGCAGGATGTGGAGTCAGGATCTGCAGTTCAATCATCTTCCTCAAAAAGTGAACATAACCTTGGTAAAGCTGTTGAAAATGTTAACCAAGAAATTACCTCACCTAGCTCAGTGATGAACATCCATGCAATGGAAGATTTCAGGAGTAGAGGAGCTGAAACATTGAAGTTTCTCAGTAATTTGGATCAGATCAAATTGCCTGGACTTCACCCATCAATGTCAATGGACGATTTGGTAAGCCACATTGGACATTGCATTTCAGAACAGATGGGATCCGACAATCCGAGTTTGGCTGGTGACAGCCTGTATAGCAGATCTATTCTGGAAGAATTTTCTCAGTACTTGTTCAATGACTCTCAACATGCAACTACCTCTGATGAACAGCGTGTGATGTCAAGGGTGAACTCACTTTACTGCCTTCTGCAGAAGGATCCTTCTTCAGCAGAAGACATAAacacaatggccaaaaatggcaatagtctgagagatgcaaatgctttgtcaaggAAGGATCCTTCTACAGCAGAAGACACAAACACAATGACCAGAAATGACAATGGTCTTGATGCGGATGAGGGTGGAAAAGTTGGTGTCAGTAACTCTAACACCACTGAATTGTCACCATGCAAAATTAAAGTGCCTGATTTGGAAGTTCAACCGGATGATGCTTCTGGCTGCAAGCAGGGGgctaagttacccacagcccctcctgagaccgtgactgtggacatgtttaaatctgtcatggcagtggataagaaggtagcagatgggttgctaaggcttatccttctaaagggtcctctaggcaattgtgttttcacaggggattatgacagaaaggctctagacaatacgcttcgtgcattctgtaaatcctga 2394 0.1729 MASTATNFSLSLCANQQTPIPKPSFFSNNNHLHFNSNNNWAWASVSTSRKSRICATSSQVMDPSAAKSEPALPTIVEVDLGSRSYPIYIGSGLLNQPDYLQRHVHGKRVLVVTNETVAPLYLDKVVDALTRGNPNVSVESVILPDGEQYKDMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGFAASAFLRGVNFIQIPTTVMAQVDSSVGGKTGINHRLGKNMIGTFYQPQCVLIDTDTLNTLPDRELASGLAEVIKYGLIRDAEFFEWQEKNMHLLLARDPSVMAYAIKRSCENKAEVVSLDEKESGLRATLNLGHTFGHAIETGVGYGQWLHGEAVAAGTVMAVDMSYRLGWIDDSLVKRVGDILKQAKLPTAPPETVTVDMFKSVMAVDKKLARRPLFFREINPQPRKHTLWQATSDFTGGQASINRRHFLQCPQGLLGKHFEKLIQCDPRLNYLSQHPDLVLDSPYFEPGTTSVHDHIESSDGFDRKSEERSGIFGLQDVESGSAVQSSSSKSEHNLGKAVENVNQEITSPSSVMNIHAMEDFRSRGAETLKFLSNLDQIKLPGLHPSMSMDDLVSHIGHCISEQMGSDNPSLAGDSLYSRSILEEFSQYLFNDSQHATTSDEQRVMSRVNSLYCLLQKDPSSAEDINTMAKNGNSLRDANALSRKDPSTAEDTNTMTRNDNGLDADEGGKVGVSNSNTTELSPCKIKVPDLEVQPDDASGCKQGAKLPTAPPETVTVDMFKSVMAVDKKVADGLLRLILLKGPLGNCVFTGDYDRKALDNTLRAFCKS 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00716 797 MobiDBLite consensus disorder prediction 661 705 - -
Gma11g00716 797 PANTHER 3-DEHYDROQUINATE SYNTHASE, CHLOROPLASTIC 73 402 - -
Gma11g00716 797 PANTHER 3-DEHYDROQUINATE SYNTHASE 73 402 - -
Gma11g00716 797 PANTHER 3-DEHYDROQUINATE SYNTHASE 731 793 - -
Gma11g00716 797 Gene3D - 61 246 - -
Gma11g00716 797 SUPERFAMILY Dehydroquinate synthase-like 77 407 - -
Gma11g00716 797 TIGRFAM aroB: 3-dehydroquinate synthase 85 401 IPR016037 GO:0003856|GO:0005737|GO:0009073
Gma11g00716 797 MobiDBLite consensus disorder prediction 661 690 - -
Gma11g00716 797 PANTHER 3-DEHYDROQUINATE SYNTHASE, CHLOROPLASTIC 731 793 - -
Gma11g00716 797 Hamap 3-dehydroquinate synthase [aroB]. 73 795 IPR016037 GO:0003856|GO:0005737|GO:0009073
Gma11g00716 797 Gene3D - 247 407 - -
Gma11g00716 797 MobiDBLite consensus disorder prediction 509 533 - -
Gma11g00716 797 CDD DHQS 84 398 - -
Gma11g00716 797 Gene3D - 721 797 - -
Gma11g00716 797 MobiDBLite consensus disorder prediction 504 533 - -
Gma11g00716 797 Pfam 3-dehydroquinate synthase 141 398 IPR030960 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00716 Gma-Chr11 6018533 6030240 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00716 K01735 - gmx:100806628 776.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00716 11 6018533 6030240 Gma11g00716 11 6018533 6030240 ECH