Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00652 ATGAAGCATTTTGCCTTGGTGTTTCTTTTGGCCATTTTGGTCCCTCAGGAGTGTTTCCATGTCAGTGTGGAAGCAAGGGATGATTTCGTCAGAACCAGAGGCATCCACTTCATGCAGAATGGATACCCTTACTATGCAAATGGCTTCAATGCCTACTGGTTAATGTACACAGCTTCTGACCCATCTCAGAGATTCAAGGTTTCAAATGCCTTCAGAGAAGCAGCAAGCCACGGCCTTACTGTTGCTAGAACTTGGGCCTTCAGTGATGGTGGCTATAGACCACTACAATATTTCCCTGGCTTCTATAATGAACAAATGTTCACGGGGTTAGATTTTGTTGTATCTGAGGCCAGGAAGTACGGGATTAAGCTCATACTGAGCTTGGTGAACAACTATGAAAATTTTGGAGGCAAGAAGCAGTATGTGAACTGGGCTAGGAGTCACGGCCAGTACCTTACTTCAGATGATGATTTCTTTAGGAGCCCTGTTGTTAAGGGTTATTACATGAACCATGTGAGGACTGTTCTCAACAGATATAACAGATTTACTGGCATGCATTACAAAGATGACCCAACAATCATGGCCTGGGAGCTTATGAATGAACCTAGGTGCACATCGGATCCTTCAGGGAGAACTATTCAGGCGTGGATCACGGAAATGGCTTCGTTTGTTAAGTCCATAGACAGGAACCACTTATTGGAGGCTGGACTAGAAGGGTTTTACGGACAATCAACACCACAAAGAAAGAGATTGAATCCCGGTTTCGACATAGGAACAGACTTCATCGGAAACAATCGAATACCGGCCATTGATTTTGCAACAGTCCACTGCTACCCCGACCAATGGGTATCGAGCTCAAATATTCAGTATCAACTTTCATTCTTGAACAACTGGCTGAGTGCGCACTTCATAGACGCGCAATACCGTATAAAGAAACCAATACTAGTGGCGGAATTTGGGAAATCATTTAAGAGTTCGAGTTCGTACGAGAGGGATGAGGTGTTCAATTCAGTGTATTACAAAATATATGCTTCTGCTAAGAGAGGAGGGGCAGCGAGTGGAGCATTGTTCTGGCAGCTTCTGACGGAGGGTATGGAGTCTTTCCAAGATGGTTACGGAATAATTCTTGGGCAGAGTTCCTCTACGGCCAATCTCATTGCTCGCCAGTCCCGCAAGCTGTACCTGATTCGGAAGATCTTCGCGAGGGTCGCGAACATGCGGCGATGGCAAAGGGCCAGAGCTAGAGGTGGAAACGGAGGCAGATACATTGGCAACTGA 1278 0.4585 MKHFALVFLLAILVPQECFHVSVEARDDFVRTRGIHFMQNGYPYYANGFNAYWLMYTASDPSQRFKVSNAFREAASHGLTVARTWAFSDGGYRPLQYFPGFYNEQMFTGLDFVVSEARKYGIKLILSLVNNYENFGGKKQYVNWARSHGQYLTSDDDFFRSPVVKGYYMNHVRTVLNRYNRFTGMHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASFVKSIDRNHLLEAGLEGFYGQSTPQRKRLNPGFDIGTDFIGNNRIPAIDFATVHCYPDQWVSSSNIQYQLSFLNNWLSAHFIDAQYRIKKPILVAEFGKSFKSSSSYERDEVFNSVYYKIYASAKRGGAASGALFWQLLTEGMESFQDGYGIILGQSSSTANLIARQSRKLYLIRKIFARVANMRRWQRARARGGNGGRYIGN 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00652 425 Gene3D Glycosidases 25 397 - -
Gma11g00652 425 PANTHER - 1 414 IPR045053 GO:0004553
Gma11g00652 425 Pfam Cellulase (glycosyl hydrolase family 5) 66 330 IPR001547 GO:0004553|GO:0071704
Gma11g00652 425 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE-LIKE PROTEIN 1 414 - -
Gma11g00652 425 SUPERFAMILY (Trans)glycosidases 29 385 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00652 Gma-Chr11 5405091 5407855 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00652 1 421 Glycoside Hydrolase AT5G66460 66.588 0.0 584
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00652 K19355 - gmx:100784013 825.854
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00652 11 5405091 5407855 Gma11g00652 11 5405091 5407855 ECH
Gma11g00652 11 5405091 5407855 Gma01g01754 01 53216043 53218822 ECH
Gma01g01754 01 53216043 53218822 Gma11g00652 11 5405091 5407855 GST