Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00648 ATGGGAACCTTGGGCAGAGCTTTCTACGCCGTCGGATTTTGGATCCGCGAGACCGGCCAAGCCATCGATCGCCTCGGCTCTCGTCTCCAAGGCAACTACCTCTTTCAAGAACAGCTATCTAGGCATCGACCTCTGATGAATCTGTTCGACAAAGCTCCCTCGGTTCACAGGGATGCATTTGTGGCCCCCAGTGCCTCCCTCCTCGGCGATGTCCACGTTGGCCCAGCTTCCTCCATTTGGTATGGATGCGTTCTCAGAGGTGATGTTAACAGCATTACTATTGGATCTGGAACTAATATACAAGACAATTCTCTTGTTCATGTTGCCAAGTCTAATTTAAGTGGAAAAGTCTTGCCAACTATCATTGGAGATAATGTCACTGTAGGTCATAGTGCTGTGTTACAAGGATGTACTGTTGAGGATGAGGCATTTATTGGCATGGGTGCAACCTTGCTTGATGGTGTATATGTTGAGAAACATGCCATGGTTGCTGCTGGAGCTCTTGTCAGGCAGAATACAAGGATCCCTTATGGAGAGGTTTGGGGAGGTAATCCGGCAAGGTTCTTGAGAAAGCTCACAGAAGATGAAATGACCTTCTTCTCACAATCTGCCTTAAATTATTCTAATTTGGCTCAGGCTCATTCTGCTGAAAATGCAAAAGGACTCGATGAGACTGAATTTGTAAAGGTTCTTCACAAGAAATTTGCTCGTCATGGTGACGAATATCATTCAGTGCTAGGTGGTGTTCAAGAAACTCCTACAGAGCTTAAATCTTCAGATAATGTTTTGCTAGACAAAGTTCCCAAGGCTTAG 813 0.4563 MGTLGRAFYAVGFWIRETGQAIDRLGSRLQGNYLFQEQLSRHRPLMNLFDKAPSVHRDAFVAPSASLLGDVHVGPASSIWYGCVLRGDVNSITIGSGTNIQDNSLVHVAKSNLSGKVLPTIIGDNVTVGHSAVLQGCTVEDEAFIGMGATLLDGVYVEKHAMVAAGALVRQNTRIPYGEVWGGNPARFLRKLTEDEMTFFSQSALNYSNLAQAHSAENAKGLDETEFVKVLHKKFARHGDEYHSVLGGVQETPTELKSSDNVLLDKVPKA 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00648 270 SUPERFAMILY Trimeric LpxA-like enzymes 45 211 IPR011004 -
Gma11g00648 270 PANTHER YRDA, PUTATIVE-RELATED 1 270 - -
Gma11g00648 270 Pfam Hexapeptide repeat of succinyl-transferase 119 151 IPR001451 -
Gma11g00648 270 PANTHER DYNACTIN SUBUNIT P25 1 270 - -
Gma11g00648 270 CDD LbH_gamma_CA_like 54 212 - -
Gma11g00648 270 Gene3D Hexapeptide repeat proteins 44 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00648 Gma-Chr11 5377143 5380886 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00648 K01726 - gmx:100782403 542.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00648 11 5377143 5380886 Gma11g00648 11 5377143 5380886 ECH
Gma11g00648 11 5377143 5380886 Gma01g01759 01 53254543 53258591 ECH