Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00370 atgacggtttcttctgagaattgcgtctctagccagagttctctcactagacttgctccacttgaagcagtgctctttgatatagatggaactctttgtgattctgatccactccattactatgccttccgcgaaatgcttctagagattggttttaatgaaggtgttcctataacagaggaattttttattgagactgttgctggcaaacacaatgatgatatagcctcggttctctttcctggtgatctggaacgaggtttaaagtttgttgatgataaggaagccatgttccggagattggccgcagagcaagtgaagcctttgaatggccttgataaagtgaggaaatggattgaaaatcatgggctgaagagagctgcagttaccaatgctccaagggcaaatgcagaactcatgatctcaatacttggtctctcagatttctttgatgctgttattattggtggtgaatgtgaacgtgccaagcctcatccagacccctacctgaaaggtcttgaagctctgaaggcatcaaaagatcacacatttgtATTTGAGGATTCTGTTTCAGGGATCAAAGCTGGAGTTGCAGCTGGGATGCCTGTTATTGGTATAGCTACTCGTAACCCGGAAAATTTATTGATGGAAGCAAAACCTGCCTTTCTGATTAAGGATTATGAGGATCCAAAATTGTGGGCTGCTTTGGAAGAACTTGACAAGGCTGGAAAAAAAGTAAAAATAAGTGAACTCTACCTTTTCATAAACTTGAAACAACACATAGTGACCAGTGAGATTCTTTTTAGCGGATTCGACAAGTACGATGCTTCTTCTGGTGAAGTAAATCTCTCTTTTTTCGGTATAACCATGAGCAGCTTCTTGTTAACATTCCCTTACTTCCCTAACGACGCTTCGTGGCAGGTAAAACTTTGTCCTTCTCCACAAATTCGCCTTGTCTGCGTCAAAACCAATCTCAAAACACTCACCAAGGCTTCTTCTCAGAATTGCGTCGAAAGcagcatgagttctctcaccagtcttgctccactcgaagcagtgctctttgatgttgatggaactctctgtgattctgatccactccactattatgctttgcgtgaaatgctccaagagcttggttttaatggaggtgctcctataacagaggaattctttgttgagacattttctggcaagcacagtgatgatactgccttggttgtctttcctggtgatctggaacgaggtttaaagtttgtagaagataaggaagccatgttccggagattggcttcagagcaactgaatcccttgaaaggccttgataaagtgaggaaatgggttgaaaaccatggtctgaagagagctgcagtcaccaatgctccaaggaaaaatgcagaactcattatctcaaaacttggtctaacagatttctttgatgctgttattattggtgatgaatgtgaacatgccaaacctcatccagaaccctacttgaaagcacttgaagttctgaaggcatcaaaggatcatgcatttgtATTTGAGGATTCTGCTTCAGGGATAAAAGCTGGAGTGGCAGCTGGGATGCCTGTTATAGGTTTAGCTACAAGAAACCCGGAGAATTTACTGATGGAAGCAAAGCCTGCCTTTCTGATTAAGGATTATGAGGATTCAAAATTGTGGGCAGCTTTGGAAGAACTTGACAAGGCTGGTGCACGTTAA 1725 0.1565 MTVSSENCVSSQSSLTRLAPLEAVLFDIDGTLCDSDPLHYYAFREMLLEIGFNEGVPITEEFFIETVAGKHNDDIASVLFPGDLERGLKFVDDKEAMFRRLAAEQVKPLNGLDKVRKWIENHGLKRAAVTNAPRANAELMISILGLSDFFDAVIIGGECERAKPHPDPYLKGLEALKASKDHTFVFEDSVSGIKAGVAAGMPVIGIATRNPENLLMEAKPAFLIKDYEDPKLWAALEELDKAGKKVKISELYLFINLKQHIVTSEILFSGFDKYDASSGEVNLSFFGITMSSFLLTFPYFPNDASWQVKLCPSPQIRLVCVKTNLKTLTKASSQNCVESSMSSLTSLAPLEAVLFDVDGTLCDSDPLHYYALREMLQELGFNGGAPITEEFFVETFSGKHSDDTALVVFPGDLERGLKFVEDKEAMFRRLASEQLNPLKGLDKVRKWVENHGLKRAAVTNAPRKNAELIISKLGLTDFFDAVIIGDECEHAKPHPEPYLKALEVLKASKDHAFVFEDSASGIKAGVAAGMPVIGLATRNPENLLMEAKPAFLIKDYEDSKLWAALEELDKAGAR 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00370 574 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE DOMAIN-CONTAINING PROTEIN SGPP 3 242 - -
Gma11g00370 574 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE DOMAIN-CONTAINING PROTEIN SGPP 330 571 - -
Gma11g00370 574 Gene3D - 22 229 IPR023214 -
Gma11g00370 574 SUPERFAMILY HAD-like 341 567 IPR036412 -
Gma11g00370 574 SFLD C1.5.6: HAD, Beta-PGM, Phosphatase Like 350 560 - -
Gma11g00370 574 SFLD C1.5.6: HAD, Beta-PGM, Phosphatase Like 21 229 - -
Gma11g00370 574 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 350 560 - -
Gma11g00370 574 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 21 229 - -
Gma11g00370 574 Gene3D - 351 558 IPR023214 -
Gma11g00370 574 PANTHER 6-PHOSPHOGLUCONATE PHOSPHATASE 3 242 - -
Gma11g00370 574 PANTHER 6-PHOSPHOGLUCONATE PHOSPHATASE 330 571 - -
Gma11g00370 574 Gene3D Putative phosphatase; domain 2 365 433 IPR023198 -
Gma11g00370 574 Gene3D Putative phosphatase; domain 2 36 104 IPR023198 -
Gma11g00370 574 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 98 206 IPR006439 -
Gma11g00370 574 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 424 534 IPR006439 -
Gma11g00370 574 Pfam Haloacid dehalogenase-like hydrolase 353 534 IPR041492 -
Gma11g00370 574 Pfam Haloacid dehalogenase-like hydrolase 24 206 IPR041492 -
Gma11g00370 574 CDD HAD_BPGM-like 23 208 - -
Gma11g00370 574 SUPERFAMILY HAD-like 18 238 IPR036412 -
Gma11g00370 574 CDD HAD_BPGM-like 352 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00370 Gma-Chr11 3026224 3031900 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00370 - - ccaj:109800144 484.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00370 11 3026224 3031900 Gma11g00370 11 3026224 3031900 ECH