Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00363 ATGGACTCGCAACAGAACAATCTTTTCGAGACCGCTTCGCAACCCGACACCGGCAACGACGCCTACACCTTTCTCGAGTTCAACACGCAGGGCGAGGATTTCGACTATCCCGAGTTCCGCGACCCGATTAGGTCGCCGGTTGCGTGGCCAACGCCGTCTGATTCGCTCGCGGACCCGTCGGAGCGAGGCGGCGGCGGGGGAGGCGGTTCTGATCACCAATCAGATACCTCGCCTGTCTCCGCGGCTCCCGGGAGTGCCACAAAGGGCGGCCGGTCGGGGAGCGGTGGTGGCGGGAACAGCAGCCAGATGGTGGATGCGCTCGCGGCGGGGATGAGCGGATTGAATTTCGAGGACACCGGTGATGATGATAACTATGAGTATGGGAAAGGGGATTTCACTGAACACGCTTGCCGGTATTGCGGGGTTTCCAATCCCGCGTGTGTTGTGAGGTGCAATGTGCCTTCTTGTCGCAAGTGGTTCTGTAATTCTCGGGGGAACACTTCTGGATCGCATATCGTCAATCACCTGGTTCGGGCTAAACACAAGGAAGTCTGCCTACACAAAGATAGTCCGTTGGGAGAAACAATTCTTGAATGCTACAATTGTGGATGTCGTAATGTGTTTCTTCTTGGATTTATTTCTGCAAAGACGGAAAGTGTAGTCGTCCTTCTTTGTCGTGAACCTTGCTTGAGTGTTAATGCCTTGAAGGACATGAATTGGGACCTTAGTCAATGGTGCCCCTTGATTGATGATAGGTGTTTCTTGCAGTGGCTTGTCAAGATCCCATCTGAACAGGAGCAGTTAAGGGCTCGCCAAATAAGTGCACAGCAAATAAATAAGGTGGAAGAGTTGTGGAAGACAAATCCTGATGCTTCTTTTGAGGACCTTGAGAAGCCTGGTGTAGATGATGAACCTCAGTCCGTGGCTTTGAAATATGAAGATGCATATCAGTATCAAAATGTATTTGCTCCTCTTATTAAGCTTGAAGCCGATTATGATAAGATGATGAAGGAATCACAAAGCAAGGACAATGTCACTATCCGATGGGATATTGGTCTTAATAAGAAGCGTGTTGCATACTTTGTATTTCCAAAGGAAGATAACGAGTTGCGGCTTGTGCCTGGTGATGAATTACGATTGCGTTATTCTGGTGATGCTGCTCATCCTGCATGGCAGTCAGTGGGTCACGTGATTAAGCTAACTGCACAAGAGGAGGTTGCACTGGAGCTTCGTGCTAATCAGGGGGTTCCAGTTGATGTTAACCATGGTTTCAGTGTTGATTTTGTCTGGAAAAGTACAAGTTTTGATAGGATGCAGGGAGCTATGAAAACCTTTGCTGTGGATGAGACAAGTGTTAGTGGGTATATTTACCATCACTTATTGGGTCATGAAGTTGAGGTTCAAATGGTGCGTAATGCCCTGCCTCGTCGCTTTGGTGCACCCGGGCTTCCAGAGCTGAATGCATCTCAAGTTTTTGCTGTCAAGAGTGTGCTTCAGAGGCCTATTAGTTTGATTCAAGGACCACCTGGAACTGGTAAGACCGTAACATCTGCAGCACTTGTATATCACATGGCCAAGCAAGGCCAGGGGCAGGTTTTGGTTTGTGCTCCCAGTAATGTAGCTGTGGACCAGCTAGCTGAAAAGATAAGTGCTACTGGATTAAAGGTTGTGAGGCTTTGCGCAAAGTCAAGGGAAGCTGTGAGTTCTCCCGTTGAGCATTTAACTCTCCACTATCAGGTTCGACATCTTGACACATCAGACAAGAGCGAACTTCATAAGTTACAACAGCTGAAGGATGAACAAGGCGAACTTTCCAGCAGTGATGAGAAAAAATACAAAGCACTTAAGCGAGCAACAGAAAGGGAGATTTCTCAGAGTGCTGATGTGATCTGCTGTACATGTGTTGGTGCTGGAGATCCTCGGCTTGCAAATTTTAGGTTCCGTCAGGTACTTATTGATGAGTCCACTCAAGCAACTGAACCCGAGTGCCTTATACCCTTGGTTCTTGGAGCAAAGCAGGTTGTTCTTGTTGGTGATCATTGTCAGCTTGGTCCAGTTATTATGTGCAAGAAAGCAGCCCGTGCTGGGTTAGCACAGTCACTTTTTGAACGCCTTGTTCTACTTGGTGTCAAACCAATTAGGTTGCAGGTTCAGTATCGTATGCATCCATGCCTTTCAGAATTTCCCTCAAACAGCTTCTATGAAGGCACCCTGCAAAATGGAGTCACTGTTAATGAAAGACAATCTTCCGGAATTGATTTTCCTTGGCCAGTGCCAAACCGTCCCATGTTTTTTTATGTTCAGATGGGACAAGAAGAGATAAGTGCTAGTGGAACATCTTATTTAAATAGGACTGAGGCTGCAAATGTTGAAAAGATTGTAACTACTTTCTTAAAAAGTGGTGTGGTTCCAAGTCAGATTGGTGTGATAACACCTTATGAGGGGCAAAGGGCTTATATTGTGAACTATATGTCAAGAAATGGTGCTCTCAGGCAGCAGCTTTACAAGGAGATTGAGGTTGCTAGTGTTGATTCCTTTCAAGGAAGGGAGAAAGACTACATCATTCTGTCTTGTGTTAGAAGTAATGAACATCAGGGCATTGGATTCCTGAATGATCCTAGGAGGCTCAACGTTGCTTTGACACGAGCAAGATATGGCATTGTTATTTTGGGAAACCCTAAAGTTTTGAGCAAGCAGCCTCTATGGAATAGTTTATTGACTCACTACAAGGAGCATGAGTGCTTAGTTGAAGGGCCTTTAAATAACTTGAAGCAAAGTATGGTTCAGTTCCAGAAACCCAAGAAGATTTACAATGAACGAAGGCTTTTTTATGGGGGTGGACCTGGAATTGCATCTAATGATAATTTTGGTAACGTTGGATCTGGTGCTGGCACAAGTTCAGATCGGAGGAGCAGTCGAGGAAGGGGATCTTATATACCTCCTGGTCCACCAAATGGAACTCATAAGCCTGGAGTGCATCCTGCTGGATATCCTCCTGTGCCAAGGGTTCCCTTGCCTCATTTTCATGGTGGTCCCCAATCTCAACCATATGCCATTCCATCTCGTGGGGCTGTTCATGGACCTGTTGGGGCAGTTCCTCATGTTCCATCTCCAGGGAGTCGAGGTTTTGGGGCTGGGAGAGGTAATTCTGGTGCTCCTCCAATTGGCAATCATCTACCTCATCAACAAGGCACCCAACAGCCTATTGGATCTACATTTAACTTCCCTGCTCTAGAGAATCCCAACAGCCAGCCATCTGTTGGTGGTCCATTATCCCAACCTGGGTTTGCCAACAATATGCATGTTCAAGGGGCTGGCCAATCATTTCGTGATCAATTTTCTATGCCTGGAATGTCCCAGGACTTCTTGGGCGATGACTTCAAAAGCCAGGGATCTCATGTTCCGTATAATGTCACTGATTTCTCTACGCAGGCTTCTCAAAGTGGATATGCTGTTGATTATGCTACACAAGGAGCACAAGGTGGATTCCCAGGGAATTTTCTTAACCAGAATTCTCAAGCTGGATATTCTCGCTTTGGTTCTGGAAACGACTTTATGTCACAGGACTACATGGGCCATGGATCACAAGGCCTTTTCACTCAGGTGGGGTTCAGTGATCCCTTGCAAGATGATGCAACACAGAGCCATTTCAGTGTGGCAAATGCCAACCCTCTTCAGTCCCAGATGAATTCTCTTTACTCCCAACCTTTTGCTCACTACAACACACAGCCGCTTAACATGCAGGCTACCCAACAGCAGCCTCAGGCTCAGAACTCCCAAAATCAGAAAATCCACTATAACGTTTGA 3807 0.4676 MDSQQNNLFETASQPDTGNDAYTFLEFNTQGEDFDYPEFRDPIRSPVAWPTPSDSLADPSERGGGGGGGSDHQSDTSPVSAAPGSATKGGRSGSGGGGNSSQMVDALAAGMSGLNFEDTGDDDNYEYGKGDFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLSVNALKDMNWDLSQWCPLIDDRCFLQWLVKIPSEQEQLRARQISAQQINKVEELWKTNPDASFEDLEKPGVDDEPQSVALKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVGHVIKLTAQEEVALELRANQGVPVDVNHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNALPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAALVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSDKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIRLQVQYRMHPCLSEFPSNSFYEGTLQNGVTVNERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLKSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYNERRLFYGGGPGIASNDNFGNVGSGAGTSSDRRSSRGRGSYIPPGPPNGTHKPGVHPAGYPPVPRVPLPHFHGGPQSQPYAIPSRGAVHGPVGAVPHVPSPGSRGFGAGRGNSGAPPIGNHLPHQQGTQQPIGSTFNFPALENPNSQPSVGGPLSQPGFANNMHVQGAGQSFRDQFSMPGMSQDFLGDDFKSQGSHVPYNVTDFSTQASQSGYAVDYATQGAQGGFPGNFLNQNSQAGYSRFGSGNDFMSQDYMGHGSQGLFTQVGFSDPLQDDATQSHFSVANANPLQSQMNSLYSQPFAHYNTQPLNMQATQQQPQAQNSQNQKIHYNV 1268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00363 1268 PANTHER DNA2/NAM7 HELICASE FAMILY 111 1037 IPR045055 -
Gma11g00363 1268 CDD DEXXQc_UPF1 485 720 - -
Gma11g00363 1268 Gene3D - 571 623 - -
Gma11g00363 1268 MobiDBLite consensus disorder prediction 954 1101 - -
Gma11g00363 1268 MobiDBLite consensus disorder prediction 954 973 - -
Gma11g00363 1268 MobiDBLite consensus disorder prediction 1059 1101 - -
Gma11g00363 1268 Pfam AAA domain 698 893 IPR041679 -
Gma11g00363 1268 PANTHER REGULATOR OF NONSENSE TRANSCRIPTS 1-LIKE PROTEIN 111 1037 - -
Gma11g00363 1268 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 482 944 IPR027417 -
Gma11g00363 1268 MobiDBLite consensus disorder prediction 1248 1268 - -
Gma11g00363 1268 Gene3D - 720 931 IPR027417 -
Gma11g00363 1268 Gene3D - 341 429 - -
Gma11g00363 1268 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 494 626 IPR014001 -
Gma11g00363 1268 CDD 1B_UPF1-like 341 428 IPR040812 -
Gma11g00363 1268 Pfam RNA helicase (UPF2 interacting domain) 135 288 IPR018999 GO:0000184|GO:0003723|GO:0003724|GO:0005524|GO:0005737|GO:0008270
Gma11g00363 1268 Pfam RNA helicase UPF1, 1B domain 340 429 IPR040812 -
Gma11g00363 1268 Gene3D - 449 719 IPR027417 -
Gma11g00363 1268 MobiDBLite consensus disorder prediction 1 26 - -
Gma11g00363 1268 CDD SF1_C_Upf1 721 910 IPR041679 -
Gma11g00363 1268 MobiDBLite consensus disorder prediction 983 1006 - -
Gma11g00363 1268 Pfam AAA domain 585 688 IPR041677 GO:0004386
Gma11g00363 1268 CDD ZBD_UPF1-like 136 258 IPR018999 GO:0000184|GO:0003723|GO:0003724|GO:0005524|GO:0005737|GO:0008270
Gma11g00363 1268 Pfam Type III restriction enzyme, res subunit 491 553 IPR006935 GO:0003677|GO:0005524|GO:0016787
Gma11g00363 1268 MobiDBLite consensus disorder prediction 1 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00363 Gma-Chr11 2987737 3000561 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00363 K14326 - gmx:100793750 2495.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00363 11 2987737 3000561 Gma11g00363 11 2987737 3000561 ECH
Gma01g02051 01 55864103 55876721 Gma11g00363 11 2987737 3000561 GST