Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00356 ATGGCTTTAACACTTCGCTCTTCAATTTCCCTCGCCAGCCAGAAAGAAACCAAACTCCAAAAACCCGATGACGAGGTTCCCACCAAAGTGTTTAACTTTGCAAAAGCCAACCCATCTTTCCGTCTTAGAGCAAAGAGTTCCATGCAACAAACACATGTCACAGGAGACAACAACAAGAACAAAAACAACAACTTCAACTCCGAAGTAACGATGATAAACGAGAAAAGGGAGAAGGTTCACGCGCCATCGGTTGCACATAGCCACAATGATTCAATGAGAGTTCCCGTGTTTGTGATGCTTCCGTTGGACACTGTAACAATGGGAGGGACTTTGAATAAGCCGAGAGCAATGAATGCTAGTTTGATGGCACTGAAGAGTGCGGGAGTGGAAGGAGTGATGGTGGATGCTTGGTGGGGTTTGGTGGAAAAAGAGGGACCCTTGAAGTATAATTGGGAAGCCTATGCTGAACTTGTGCAGATGGTTCAAAGGCATGGCTTGAAGCTTCAGGTTGTCATGTCTTTCCATCAGTGTGGAGGAAATGTTGGAGACTGTTGCAGCATTCCTCTACCTCCATGGGTGTTGGAAGAAATCAGAAAGAACCCTGAGATGGTTTACACAGACAGATCAGGGAGGAGGAATCCTGAGTACATCTCATTGGGCTGTGATTCAATGCCTGTTCTGCGAGGAAGGACTCCCCTTCAAGTCTACTCTGATTACATGAGGAGCTTCCGTCACAGATTCAGAGACTATTTGGGCAGTGTTATCATTGAAATTCAAGTGGGGATGGGTCCTTGTGGGGAGCTGAGATATCCGTCTTATCCAGAAAGCAATGGAACATGGAGGTTTCCGGGAATTGGAGAATTCCAGTGCTATGACAAGTATATGAGAGCTTCCTTGGAAGCATCAACTGAGGCCATTGGGAAGAAAGAGTGGGGGAAAAGTGGACCACATGACTCAGGCCAATACAACCAATTTCCTGAAGACACTGGATTTTTCAAAAGGGAAGGTACATGGAACACAGAATATGGACAATTCTTCCTTGACTGGTACTCCACCAAACTTGTTGAACATGGTGAGAAAATCCTTGTATCAGCCAAAGGCATATTCAACTCATGTGGGGTGAAACTATCTGCCAAAGTAGCTGGAATTCATTGGCACTACAAGACTAGGTCACACGCGGCTGAACTAACTGCAGGCTACTACAACACGCGGTTTCGCGATGGATACCTACCAATAGCACAAATGGTGGCAAAACATGGAGTTGTGTTAAACTTCACCTGCATGGAAATGAGGGACAGAGAGCAACATGAGCATTGTTCCCCTGAGGGGTTGGTTCATCAAGTGAAGATGGCAGCCAGAACAGCAGGAGCAGAACTTGCTGGGGAGAATGCACTTGAGAGATATGATGCAGGTGCATTTTCTCAAGTTCTGTCAACAAGTAACTCTGGTTCTGGATTGGCTGCATTCACTTATCTGAGAATGAATAGGAGGTTGTTTGAGGGAGACAATTGGAGGCACTTTGTGGAGTTTGTGAAATGCATGTCTGAAGGTGGAAAGAGACAAAGGCTTCCTCAATCTGATTCTTGTGGGACTCATCTTTATGTTGGACACATCACAGGAATTCAGAAGCAGCaagagcaagctcaagaggttgctcttgtgtga 1665 0.4486 MALTLRSSISLASQKETKLQKPDDEVPTKVFNFAKANPSFRLRAKSSMQQTHVTGDNNKNKNNNFNSEVTMINEKREKVHAPSVAHSHNDSMRVPVFVMLPLDTVTMGGTLNKPRAMNASLMALKSAGVEGVMVDAWWGLVEKEGPLKYNWEAYAELVQMVQRHGLKLQVVMSFHQCGGNVGDCCSIPLPPWVLEEIRKNPEMVYTDRSGRRNPEYISLGCDSMPVLRGRTPLQVYSDYMRSFRHRFRDYLGSVIIEIQVGMGPCGELRYPSYPESNGTWRFPGIGEFQCYDKYMRASLEASTEAIGKKEWGKSGPHDSGQYNQFPEDTGFFKREGTWNTEYGQFFLDWYSTKLVEHGEKILVSAKGIFNSCGVKLSAKVAGIHWHYKTRSHAAELTAGYYNTRFRDGYLPIAQMVAKHGVVLNFTCMEMRDREQHEHCSPEGLVHQVKMAARTAGAELAGENALERYDAGAFSQVLSTSNSGSGLAAFTYLRMNRRLFEGDNWRHFVEFVKCMSEGGKRQRLPQSDSCGTHLYVGHITGIQKQQEQAQEVALV 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00356 554 MobiDBLite consensus disorder prediction 1 24 - -
Gma11g00356 554 Pfam Glycosyl hydrolase family 14 97 510 IPR001554 GO:0000272|GO:0016161
Gma11g00356 554 MobiDBLite consensus disorder prediction 1 16 - -
Gma11g00356 554 SUPERFAMILY (Trans)glycosidases 93 517 IPR017853 -
Gma11g00356 554 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 128 142 IPR001554 GO:0000272|GO:0016161
Gma11g00356 554 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 149 167 IPR001554 GO:0000272|GO:0016161
Gma11g00356 554 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 171 192 IPR001554 GO:0000272|GO:0016161
Gma11g00356 554 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 263 285 IPR001554 GO:0000272|GO:0016161
Gma11g00356 554 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 338 357 IPR001554 GO:0000272|GO:0016161
Gma11g00356 554 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 374 390 IPR001554 GO:0000272|GO:0016161
Gma11g00356 554 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 391 402 IPR001554 GO:0000272|GO:0016161
Gma11g00356 554 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 409 432 IPR001554 GO:0000272|GO:0016161
Gma11g00356 554 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 444 466 IPR001554 GO:0000272|GO:0016161
Gma11g00356 554 Gene3D Glycosidases 84 550 - -
Gma11g00356 554 PANTHER - 1 554 IPR001554 GO:0000272|GO:0016161
Gma11g00356 554 ProSitePatterns Beta-amylase active site 1. 175 183 IPR018238 GO:0000272|GO:0016161
Gma11g00356 554 PANTHER BETA-AMYLASE 1 554 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00356 Gma-Chr11 2841138 2844690 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00356 1 554 Glycoside Hydrolase AT4G17090 69.052 0.0 796
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00356 K01177 - gmx:100784912 1134.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00356 11 2841138 2844690 Gma11g00356 11 2841138 2844690 ECH