Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00324 ATGGCTCTTCCTTCACTATCCTTTCTCTTCATCTTCTCCGTCTCACACTCAATACCCTTCATTGTTATTCATGGAATTGGGGATCAGTGCTCTAACCGTGGAGTGAAAAAATTCACACAGCAACTGAGCAGCTTCTCTGGTGCTGAAGGATATTTTTCCCTATTTCTTCAGCCGGTTGGAAATGGATCATGGGATTCATGGTTTAAGCCTTTGAAAGAGCAGGTAAATAGGTCAGGTATTGTGAAGCAAGTGAAAGAATTGAAGGAAGGATACAATATTGTTGGACTTTCCCAGggaaatttaattggtcgaggcattgtggaattttgtgaaggaggacctcctataagaatctataattttacacGAGGCCCTCACACTGGTACTGCTTCAGTTCCCATATGTGGTGTGAGTATCTTCTGTGTTCTTGCAGACACCCTCATCAAGGGAGAGGTTTACAGTAGCTATATTCAAGAACACTTGGCTCCTAGTGGATATCTTAAATTACCGAACGCCATACCTGATTATTTGGAGAACTGTAGATTTCTTCCAGTGCTTAACAATGAAATACCAGATAAGAGAAATTCCACTTACAAGGAAAGATTTAGTAGCTTGCAGAATTTGGTACTTATCATGTTAGAGCACGACACTGTTTTAATACCAAGGGAAACTTCCTGGTTTGGATATTACCCAGATGGCTACTTCAAGCCCGTTTTACCACCACAATCGATATGA 735 0.3728 MALPSLSFLFIFSVSHSIPFIVIHGIGDQCSNRGVKKFTQQLSSFSGAEGYFSLFLQPVGNGSWDSWFKPLKEQVNRSGIVKQVKELKEGYNIVGLSQGNLIGRGIVEFCEGGPPIRIYNFTRGPHTGTASVPICGVSIFCVLADTLIKGEVYSSYIQEHLAPSGYLKLPNAIPDYLENCRFLPVLNNEIPDKRNSTYKERFSSLQNLVLIMLEHDTVLIPRETSWFGYYPDGYFKPVLPPQSI 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00324 244 PRINTS Palmitoyl protein thioesterase signature 11 33 IPR002472 GO:0098599
Gma11g00324 244 PRINTS Palmitoyl protein thioesterase signature 220 238 IPR002472 GO:0098599
Gma11g00324 244 PRINTS Palmitoyl protein thioesterase signature 88 104 IPR002472 GO:0098599
Gma11g00324 244 PANTHER PALMITOYL-PROTEIN THIOESTERASE/DOLICHYLDIPHOSPHATASE 1 7 243 - -
Gma11g00324 244 Pfam Palmitoyl protein thioesterase 19 234 - -
Gma11g00324 244 SUPERFAMILY alpha/beta-Hydrolases 15 242 IPR029058 -
Gma11g00324 244 Gene3D alpha/beta hydrolase 10 243 IPR029058 -
Gma11g00324 244 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 7 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00324 Gma-Chr11 2628509 2633602 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00324 13 242 Acyl Lipid Metabolism Gene Families AT3G60340 61.472 1.66e-106 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00324 K01074 - gmx:100809770 426.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00324 11 2628509 2633602 Gma11g00324 11 2628509 2633602 ECH