Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00248 ATGTGTACTCTCACAACTGTTCCTGTGCTCCCTTCTAAGCTTAACAAGCCTTCGCTTTCTCCGCACCACAATTCTCTTTTTCCCTACTGTGGAAGACGGGTCGGGAAGAAGAACAAAGCAATGGTTCCTGTTGCaaggttgttcgggccagccatatttgaagcctcaaaactgaaggttttgttcttaggagtggacgaaaataaacacccaggaaatctcccaaggacttatacgctaacccatagtgatataaccgctaagctcaccttggcaatctctcaaaccataaataattctcagCTGCAGGGGTGGTACAACAGATTTCAAAGGGACGAAGTGGTGGCACAGTGGAAAAAGGTGAAGGGAAGGATGTCTCTGCACGTTCACTGCCACATTAGTGGAGGTCATTTTCTCTTGGATATATTAGCAAGGTTAAGATACTTCATCTTCTGCAAGGAGCTACCAGTGGTGTTGAAGGCCGTCGTTCACGGCGATGAAAACCTATTCAACAGCTACCCAGAATTGCAAGATGCCTTGGTTTGGGTCTACTTTCACTCAAACATTCCAGAATTCAACAAGGTGGAATGTTGGGGCCCACTGAAGGAAGCGTCAGCACCCACAGGTGGGGTCCAGGAGGAGGGGTTGGCAATTCCACAGCCATGCCAAGAAGAATGCCAATGTTGCTTTCCACCGCTTACGTTGAGCCCTATTCAGTGGTCTAAACAAGTTCCCAGCCGCCATTACGAACCTTGTGATGGGATTGGGACCCAACAAAATCTATAA 786 0.3804 MCTLTTVPVLPSKLNKPSLSPHHNSLFPYCGRRVGKKNKAMVPVARLFGPAIFEASKLKVLFLGVDENKHPGNLPRTYTLTHSDITAKLTLAISQTINNSQLQGWYNRFQRDEVVAQWKKVKGRMSLHVHCHISGGHFLLDILARLRYFIFCKELPVVLKAVVHGDENLFNSYPELQDALVWVYFHSNIPEFNKVECWGPLKEASAPTGGVQEEGLAIPQPCQEECQCCFPPLTLSPIQWSKQVPSRHYEPCDGIGTQQNL 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00248 261 Pfam Staygreen protein 53 204 IPR024438 -
Gma11g00248 261 PANTHER PROTEIN STAY-GREEN 1, CHLOROPLASTIC 2 248 - -
Gma11g00248 261 PANTHER PROTEIN STAY-GREEN 1, CHLOROPLASTIC-RELATED 2 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00248 Gma-Chr11 1993859 1996144 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00248 K22013 - gmx:732647 543.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00248 11 1993859 1996144 Gma11g00248 11 1993859 1996144 ECH
Gma01g02157 01 56863951 56865706 Gma11g00248 11 1993859 1996144 GST