Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00214 ATGGTGAATCGTCGACGCCTCACTCGGGTGGCGACGAGCGACGATGAAGACGAAGCACCGCCGCGTCCACAACGCACGCGGAAGAGGATGAGGCTTATCGAGGAAGATAACGATGATGACGAGAATGAAGAAGAAAAAGAAGAGGAGGTGCCGGAGCCGCCTCAGCTTGCGGAGGACGCTAAACCTCTTGGTCAACCCGTTAGGGTTTCGGGAAAAGGAAGAGGCAGGAAGAGGCACCATGATTCCTTCGAGTTCGATGGCATCCAATATACTCTCGAGGATCCCGTTCTTCTTGTACCCGAGGAGAAAGGCCAAAAGCCTTATGTTGCAATTATTAAGGACATTACACAGTCTATCAATGGCAACGTGAAAGTGACGGGGCAGTGGTTTTACCGACCAGAAGAAGCTGAGAAAAAAGGTGGTGGAAACTGGCAATCGTGTGATACCAGAGAGCTGTTTTATAGTTTCCACCGTGACGATGTTCCTGCAGAGGCTGTTATGCACAAGTGTGTGGTGCATTTTGTTCCCAGACACAAACAGCTTCCAAAGCGTAAGGATCACCCCGGGTTTATTGTACAGAAGGTGTATGACACTGTGGAAAGAAAACTCTGGAGGCTGACTGATAAGGATTATGAGGAATTTAAGCAGCAAGAGATTGATGTGCTTGTTGAGAAGACTCAGCAACGTATTGGTGAACTACTTGACCTTGAGCCCGAGGAAGCCCCTGATGACGATGGGGATCAATTGAAAAATAAAAAAAGCTTCAGGAGAAAGAGTGTTTCACCTCTTGATGTTTCAAAAGAGGAGGAAGAAACTCTTAAGAGTGAACAACATCCAAAATCTGAAACACCAACGGGTTGCATAACTAATGGTTCAGAGTATTATCGGATATTGGTAGATTTCAATGCACTAACTGGAGATAGCCATCGAGACAAATGGTTGGAGAGGTTGCTTCAACGCGTTCAGTACATGTGTGATTCTAATGATAGCAAAGAAAGGGACAAAGGATTAGGGAATGCCAATTCTGATGAAATCAACAATGAAAGCAAGCATAGAAGTTCAGAATCAGCAACTGACTGTCAAGATAAGGTTCAGAAGAGTTCCAAGTCTTTTAACTGGCCAGATGTTGCTGTTTCAGCCATGGTTGCTCTCGAAAAAGCTTCTCATGATGCTCTCTCATCAGATTCTATGAAGTACAACCAAAAGTTGCGGCAATTAGCTTTTAATTTCCAGAAAAATGCAGTGTTAGCACGCCGTCTATTGAGTGGAGAGTTGGAGCCTTCAAAAATATTAAATATGACACCCAATGAATTAAAGGAGGGTTTGGTTGCTGAGGAAAAAACCAAGGAGCCTGACGAGACCCAGCACTTGCAAATGACAGATGCCCGCTGCTCAAAATGTATGGATTGTAAGGTGGGCTTGAGAGAGATTATCCAAGCTGGAAATAATGAACGTTATCAGCTGGAATGTGTTTCCTGTGGTCATTCCTGGTATGCCTCCCGGGATGAGGTGTCTATGCCGACCATAGATGCATCAGATCCAAAGGGAAACATAGGCACAGCGCCATAG 1569 0.4532 MVNRRRLTRVATSDDEDEAPPRPQRTRKRMRLIEEDNDDDENEEEKEEEVPEPPQLAEDAKPLGQPVRVSGKGRGRKRHHDSFEFDGIQYTLEDPVLLVPEEKGQKPYVAIIKDITQSINGNVKVTGQWFYRPEEAEKKGGGNWQSCDTRELFYSFHRDDVPAEAVMHKCVVHFVPRHKQLPKRKDHPGFIVQKVYDTVERKLWRLTDKDYEEFKQQEIDVLVEKTQQRIGELLDLEPEEAPDDDGDQLKNKKSFRRKSVSPLDVSKEEEETLKSEQHPKSETPTGCITNGSEYYRILVDFNALTGDSHRDKWLERLLQRVQYMCDSNDSKERDKGLGNANSDEINNESKHRSSESATDCQDKVQKSSKSFNWPDVAVSAMVALEKASHDALSSDSMKYNQKLRQLAFNFQKNAVLARRLLSGELEPSKILNMTPNELKEGLVAEEKTKEPDETQHLQMTDARCSKCMDCKVGLREIIQAGNNERYQLECVSCGHSWYASRDEVSMPTIDASDPKGNIGTAP 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00214 522 CDD BAH_plant_3 70 216 - -
Gma11g00214 522 MobiDBLite consensus disorder prediction 36 52 - -
Gma11g00214 522 MobiDBLite consensus disorder prediction 245 278 - -
Gma11g00214 522 PANTHER BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN 1 522 - -
Gma11g00214 522 ProSiteProfiles BAH domain profile. 88 207 IPR001025 GO:0003682
Gma11g00214 522 ProSiteProfiles TFIIS central domain profile. 309 466 IPR003618 GO:0006351
Gma11g00214 522 SUPERFAMILY Elongation factor TFIIS domain 2 304 439 IPR036575 GO:0006351
Gma11g00214 522 MobiDBLite consensus disorder prediction 328 365 - -
Gma11g00214 522 PANTHER BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN 1 522 - -
Gma11g00214 522 Gene3D - 297 440 IPR036575 GO:0006351
Gma11g00214 522 MobiDBLite consensus disorder prediction 8 35 - -
Gma11g00214 522 Gene3D - 68 296 IPR043151 -
Gma11g00214 522 SMART BAH_4 88 207 IPR001025 GO:0003682
Gma11g00214 522 Pfam Transcription factor S-II (TFIIS), central domain 305 450 IPR003618 GO:0006351
Gma11g00214 522 Coils Coil 30 50 - -
Gma11g00214 522 MobiDBLite consensus disorder prediction 1 81 - -
Gma11g00214 522 MobiDBLite consensus disorder prediction 238 287 - -
Gma11g00214 522 SMART mid_6 343 448 IPR003618 GO:0006351
Gma11g00214 522 MobiDBLite consensus disorder prediction 328 359 - -
Gma11g00214 522 Pfam BAH domain 89 203 IPR001025 GO:0003682
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00214 Gma-Chr11 1698743 1703387 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00214 - - gmx:100788457 1018.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00214 11 1698743 1703387 Gma11g00214 11 1698743 1703387 ECH
Gma01g02202 01 57261359 57262460 Gma11g00214 11 1698743 1703387 GST