Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00195 ATGGCAGCTTCTTCCTTTACAACATCTTCCATTCTCTTCCCATTCACAACTAGTTCTAAATCCCCTCCTTCTCAACTATTCCCCTCTTTTCCTTGCAAACATCATACCCTCCGTCTCAGACCCGTCTCAGTCTCAGCCGCTTCAACCCCAACCCCCTCCATCCAAGCCGACAAATCCCCGGTCTCCGCCACTCCCTCCAAGCTTCTCCCCTTTCGGATTGGTCACGGCTTTGACCTCCACCGATTGGAACCCGGTTATCCCCTAATCATCGGTGGAATCAACATTCCCCACGATAGAGGTTGCGAGGCTCATTCCGATGGTGACGTTCTGCTTCACTGCGTTGTTGATGCGATTCTAGGGGCGCTAGGTCTTCCTGATATTGGCCAGATTTTCCCCGATTCTGATCCTAAGTGGAAGGGTTGTGCCTCTTCCGTCTTCATCCATGAATCTGTGAGACTTATGCATGAGGCTGGTTATGAGATTGGGAATTTAGATGCTACATTGATACTTCAGAGGCCAAAACTAAGCCCACACAAGGATGCTATCAAGGCCAACTTATCTGCACTGCTTGGGGTGGACTCTTCTGTAGTAAATATCAAAGCAAAAACTCATGAAAAGGTAGACAGCCTTGGAGAAAATAGAAGTATAGCGGCTCACACAGTGGTTCTTCTAATGAAGAAATGA 684 0.481 MAASSFTTSSILFPFTTSSKSPPSQLFPSFPCKHHTLRLRPVSVSAASTPTPSIQADKSPVSATPSKLLPFRIGHGFDLHRLEPGYPLIIGGINIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGCASSVFIHESVRLMHEAGYEIGNLDATLILQRPKLSPHKDAIKANLSALLGVDSSVVNIKAKTHEKVDSLGENRSIAAHTVVLLMKK 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00195 227 SUPERFAMILY IpsF-like 70 226 IPR036571 GO:0008685|GO:0016114
Gma11g00195 227 Hamap 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 71 226 IPR003526 GO:0008685|GO:0016114
Gma11g00195 227 PANTHER 2-C-METHYL-D-ERYTHRITOL 2,4-CYCLODIPHOSPHATE SYNTHASE 21 227 - -
Gma11g00195 227 TIGRFAM ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 72 226 IPR003526 GO:0008685|GO:0016114
Gma11g00195 227 CDD MECDP_synthase 72 224 IPR003526 GO:0008685|GO:0016114
Gma11g00195 227 Gene3D - 68 227 IPR036571 GO:0008685|GO:0016114
Gma11g00195 227 PANTHER 2-C-METHYL-D-ERYTHRITOL 2,4-CYCLODIPHOSPHATE SYNTHASE, CHLOROPLASTIC 21 227 IPR003526 GO:0008685|GO:0016114
Gma11g00195 227 ProSitePatterns 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 105 120 IPR020555 GO:0008685
Gma11g00195 227 Pfam YgbB family 71 224 IPR003526 GO:0008685|GO:0016114
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00195 Gma-Chr11 1525375 1527810 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00195 K01770 - gmx:100306378 449.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00195 11 1525375 1527810 Gma11g00195 11 1525375 1527810 ECH