Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00194 ATGGAAGATCTTCGGAATTTGACGCTAAAATTCTTCTCCGATCAAGAGCTTTGCTATGCTGATATCGTCCCTCTTGCTCAGGTCCGAGCCAGAATTGAAGTCTCTGTCCTCAATTTTCTCAAAATATTAAATGCCTCCAGCCCTGCCATCTCAGATTTGCCTTTGATTCAGAGAAAATATAGCAATAGTCGAGTGAATCATGGCCTGTTGACTGAACTATCACGTGTTTTTCTCTCCAATTCCGTATCGACGAGGTCTCTGATGAGACCTAACGCAGCAAAGGCTTTTGTTAGGGTGTGGAAGGTGATGGAGATGTGCTATCAGATATTGCTTCAGGAAAAGCGTGTCACTCAGAGGGAGCTCTTCTACAAGCTGCTGTGTGATTCGCCACACCTGTTTCCTTCTCAAACACATGTCAACAGGACAATCCAAGGTTATTACCAGTGTGTTGTTTGCTTTGAATTTAATGCTTGGTGTTTTAGATGGGAATATATCAATCTGTGCCAAACAGATCTTGTAGCATTGCTTCGGTGCAGCCGATTCAGTCTTGGAATTATGGCATCTAGTCGAGGACTTGTAGCTGGCCGTCTGATTTTGCAGGAACCGGGCAAAGAGGCTGTTGATTGCTCTTTATGCGGTTCTTCTGGATTTGCAATATCTGGTGACTTGAATTTGTTGGATAGTTTGGTTCTAAATGCAGATGCTCGGTACGTTATAATTGTGGAAAAGCATGCAATATTTCAACGGCTTACTGAGGATCGTTTTTTTCATCAAATTCCAAGCATTCTTATCACGGCTAAAGGTTACCCAGATATTGCCACAAGATTTCTTCTTTACCGAATCAGTAAAGCTTTTCCTGACTTGCCAATTCTAGCTTTGGTGGATTGGAATCCAGCTGGATTAGCTATTCTATGCACCTTCAAATTTGGAAGCATAGGAATGGGCCTAGAGGCATACCGATACGCTTGCAATGTCAAGTGGTTAGGACTGCGGGGGCATGATCTACCCTTGCTGCCGAACCAATCTTTCGTTCCATTGAAGCCAAAGGATCTGCAAATTGCTCAAAGCTTGATGTCCTCGGGAATCTTACAGGATAATTACAAGGAAGAAGTGGCCTTGATGGTTCAGAGCGGAAGGAGAGCTGAAATCGAGGCCCTATACTTTAATGGATATGATTATTTGGGGAAGTACATAGCTAAAAAAATTGTACAGTCCGATTATGTATAA 1227 0.4279 MEDLRNLTLKFFSDQELCYADIVPLAQVRARIEVSVLNFLKILNASSPAISDLPLIQRKYSNSRVNHGLLTELSRVFLSNSVSTRSLMRPNAAKAFVRVWKVMEMCYQILLQEKRVTQRELFYKLLCDSPHLFPSQTHVNRTIQGYYQCVVCFEFNAWCFRWEYINLCQTDLVALLRCSRFSLGIMASSRGLVAGRLILQEPGKEAVDCSLCGSSGFAISGDLNLLDSLVLNADARYVIIVEKHAIFQRLTEDRFFHQIPSILITAKGYPDIATRFLLYRISKAFPDLPILALVDWNPAGLAILCTFKFGSIGMGLEAYRYACNVKWLGLRGHDLPLLPNQSFVPLKPKDLQIAQSLMSSGILQDNYKEEVALMVQSGRRAEIEALYFNGYDYLGKYIAKKIVQSDYV 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00194 408 CDD TOPRIM_TopoIIB_SPO 236 393 IPR034136 -
Gma11g00194 408 Gene3D - 24 151 IPR036388 -
Gma11g00194 408 Gene3D - 189 408 - -
Gma11g00194 408 Pfam Type IIB DNA topoisomerase 94 144 IPR013049 GO:0003677|GO:0003824|GO:0005524|GO:0005694|GO:0006259
Gma11g00194 408 SUPERFAMILY DNA topoisomerase IV, alpha subunit 93 408 IPR036078 GO:0003677|GO:0005694
Gma11g00194 408 PANTHER MEIOTIC RECOMBINATION PROTEIN SPO11 14 407 - -
Gma11g00194 408 PRINTS DNA topoisomerase VI subunit A family signature 180 195 IPR002815 GO:0003677|GO:0003918|GO:0005694
Gma11g00194 408 PRINTS DNA topoisomerase VI subunit A family signature 238 255 IPR002815 GO:0003677|GO:0003918|GO:0005694
Gma11g00194 408 PRINTS DNA topoisomerase VI subunit A family signature 262 283 IPR002815 GO:0003677|GO:0003918|GO:0005694
Gma11g00194 408 PRINTS DNA topoisomerase VI subunit A family signature 295 311 IPR002815 GO:0003677|GO:0003918|GO:0005694
Gma11g00194 408 PANTHER MEIOTIC RECOMBINATION PROTEIN SPO11 14 407 IPR002815 GO:0003677|GO:0003918|GO:0005694
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00194 K10878 - gmx:100784732 738.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00194 11 1521616 1524271 Gma11g00194 11 1521616 1524271 ECH