Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00192 ATGGGGTACTATTTGGTATTCGTTGGTGTGTTCTTGTGGTGTGCCATGGCTAGTCACATTAATGGACTAGCCATGATGGATGGAAAGTTAATGAGTTCCTCGGCAAATAATTATGACTATGGAGATGCTCTTGGCAAAGCCATCTTGTTTTTTGAAGGACAACGCTCGGGGAACTTGCCCGCCACCCAAAGAGTGAAGTGGAGGGGAGACTCCGCTCTCTCTGatggcaaacttcaaaacgtggatttgattggaGGATATTACGATGCTGGAGATAACGTCAAGTTTGGATGGCCAATGGCATTTACAACTAGCTTATTGAGTTGGGCTGCTGTAGAGTACGAGAGTGAGATATCTTCGGTGAACCAGCTTGGTTACCTCCACAGTGCTATTCATTGGGGCGCAGACTTTATACTGAGAGCCCACACTTCCCCAACCACCCTCTATACACAGGTGGGAGATGGGAACGCTGATCACAATTGTTGGGAGCGCCCGGAAGACATGGATACAGCAAGGGCAGTGTACAAGATAGATGCTAATTCCCCGGGAACTGAAGCCGCAGCTGAGTCTGCTGCTGCTCTTGCTGCTGCTTCAATTGTCTTCAAGAAAATAGATGCCAATTATTCCTCCACGCTATTAAGCAAGTCAAAATCACTGTTTGATTTTGCAGACAAGTATAGGGGTTCTTACTCGGGTTCTTGTCCATTCTATTGCTCGTACTCAGGTTACCAGGATGAACTGTTATGGGCTGCTTCTTGGCTATATAAGGCGAGTGGAGAAAGCAAGTACTTGAGTTACTCCATAGGCAACCAAGGTTGGAGTCAGGCGGTGTCTGAATTCAGCTGGGATAACAAATATGTTGGAGCTCAGACATTACTAACGGAGGAATTCTATGGTGGGAAGAAAGACTTGGCCAAGTTTAAGAGTGACGTTGAATCATTTATATGTTCAGTGATGCCAGCAAGTAGCTCTCTACAGATTAAAACAACTCCTGGTGGGCTTCTATTTACTAGAGACAGCAGTAATTTGCAATATGCCACGAGCTCAACCATGGTGCTATTCATTTTCTCTAAAATCCTAAACAGAAATCACATTGATAGAATACATTGTGGTTCTGCGCTTTTCACCCCGTCTCAGATTAGAGCCTTTGCAAAAACACAGGTGGACTACATACTAGGAAGCAATCCGATGAAGATGTCTTACATGGTGGGATTTGGCAGTAAATACCCAAAGCAATTACATCACAGAGGCTCATCCATCCCTTCAATCAATGTTCATCCGACCAAGGTGGGTTGCAATGATGGTCTCTCAGTTTATTACAATTCTGCTAATCCAAATCCAAATACTCATGTGGGTGCGATTGTTGGAGGCCCCGATTCAAATGACCGATTCAGTGATGCAAGATCTGACTATTCCCACAGCGAACCTACCACCTACATGAATGCTGCTTTCGTGGCTTCAGTGTCTGCTTTGCTTGGCAAAACGACCGATCGAAACCAAATTCAGGACTCTGCAGTTTCCCCATATCGATGCTAG 1536 0.4434 MGYYLVFVGVFLWCAMASHINGLAMMDGKLMSSSANNYDYGDALGKAILFFEGQRSGNLPATQRVKWRGDSALSDGKLQNVDLIGGYYDAGDNVKFGWPMAFTTSLLSWAAVEYESEISSVNQLGYLHSAIHWGADFILRAHTSPTTLYTQVGDGNADHNCWERPEDMDTARAVYKIDANSPGTEAAAESAAALAAASIVFKKIDANYSSTLLSKSKSLFDFADKYRGSYSGSCPFYCSYSGYQDELLWAASWLYKASGESKYLSYSIGNQGWSQAVSEFSWDNKYVGAQTLLTEEFYGGKKDLAKFKSDVESFICSVMPASSSLQIKTTPGGLLFTRDSSNLQYATSSTMVLFIFSKILNRNHIDRIHCGSALFTPSQIRAFAKTQVDYILGSNPMKMSYMVGFGSKYPKQLHHRGSSIPSINVHPTKVGCNDGLSVYYNSANPNPNTHVGAIVGGPDSNDRFSDARSDYSHSEPTTYMNAAFVASVSALLGKTTDRNQIQDSAVSPYRC 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00192 511 Gene3D - 34 505 IPR012341 GO:0005975
Gma11g00192 511 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 390 416 IPR018221 -
Gma11g00192 511 SUPERFAMILY Six-hairpin glycosidases 36 502 IPR008928 GO:0005975
Gma11g00192 511 PANTHER ENDO-1,4-BETA-GLUCANASE 4 502 - -
Gma11g00192 511 Pfam Glycosyl hydrolase family 9 40 486 IPR001701 GO:0004553|GO:0005975
Gma11g00192 511 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 464 482 IPR033126 -
Gma11g00192 511 PANTHER ENDOGLUCANASE 18-RELATED 4 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00192 Gma-Chr11 1512798 1515807 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00192 23 492 Glycoside Hydrolase AT4G23560 70.913 0.0 678
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00192 - - gmx:547834 1027.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00192 11 1512798 1515807 Gma11g00192 11 1512798 1515807 ECH