Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00176 ATGACAGAGGCCGACACAGATGATGTTGGTACGAAGTGTAACTTCTCGTTCGCATTCAACAACATCAATTTCTCAGACCGAATTCTCAACATTGAGGTTATACCCGACCCTCATTTCATCCGCGCCCAATCCCATTCTCTCTCTACCCTCGCTCCAAATCGTAAGAGACGCAGACTCTCTCTTATGAAAGCCAATGATGTCCTCTTGCAACCTGAGGAAAAATTAAATTGTAATTTACCAGATGCAGAGGAAGTTGTGGCAATCACTGAGGCATCACTTTCAGGTGATGAAGTTTCTCATGGCAATGATTCATCATTGGGCATGAGTTGGTCAAAAGTTCTTAGAGTTAGGACCATACAGATAAGTTCTCCAATTCTTGCAGAAAAAAGCCCCTTCTTTTACAAGTTGTTTTCAAATGTGACGCGAGAGTCTAAGCAACAAAATGTGACTCTTCAAATCCATGATTCTGAAGAGGCTGCCGTTATGGACCTACTTAATTTTATGTATAGTAATACTTTATCAAGAACGACATCTGCTGCTGTATTGGACGTGCTGATGGCTGCAGATAAATTTGAGGTTATGTCATGCATAAGGTATTGCAGTAGGATGTTGGGGTTAATGCCTATGACCTGTGAGTCTGCCTTACTTTATTTGGATCTTCCTTCAAACATTTTGACATTAGATGCAATTCAACCACTGGTAGACACAGCAAAGTTGTTTCTTGCCACACACTACAGAGACATAACAAAGTTTGCAGATGAACTGCTGAATTTACCCTTGGCTGGCATTGAAGCAGTGCTATCTAGTGATGACCTCCAGATGCCTTCAGAGGATGTTGTCTTTGAGTTTGTGCTCAAGTGGGCTAGGATACATTATCCAAAAATTGAGGACCGGAAAGATGTCCTTGAAGCACGCCTTGGTCGACTCATCCGTTTTCCATACATGAGCTCCCGAAAGCTTAAGAAGGTCTTAACATGCAATGACTTCCATCCTGACTTTGCATCAAATGTTGTTCTTGAAGCTCTCTTCTACAAGGCAGAGACACCATATCGACAACGGTCTCTTGCTGCACAAGATGCTGGCACCACCTACTCTCGATTGGTGGAGCGAGCTTACAAGCTCCGCCATGTGAAGGTGGTTGAATTTGCATTGCCCCGTCCACGGTGTGTGGTATACCTGGACCTAAAGAAAGAAGAATGTGCACAATTTTTTCCTAATGCTCGAATTTACTCTCAAGCATTCCCCCTAGGGGAGCAATGGTTTTTCTTGTCAGCTCGCTGCAATATGGACCAGCAAAATGCATCTCATTGCTTTGGGCTTTTCTTAGCAGTGCAATTCAAGGGATCAGTATCTCTTCATGTTGACTATGAATTTGCTGCTAGATCAAAATCGACTGAGGAGTATATAAGCAGGTGCAAGGGAGATTATACTTTCACGGCGGGCAAGGCTGTAGGGTATAGGAACCTGTTTGGTATTCCATGGACTGCATTCATAGCAGACGATAGCCATTTTTTCATCAAGGGATTACTTCATCTAAGGGCTGAACTTACTATTAGACAATGA 1563 0.4299 MTEADTDDVGTKCNFSFAFNNINFSDRILNIEVIPDPHFIRAQSHSLSTLAPNRKRRRLSLMKANDVLLQPEEKLNCNLPDAEEVVAITEASLSGDEVSHGNDSSLGMSWSKVLRVRTIQISSPILAEKSPFFYKLFSNVTRESKQQNVTLQIHDSEEAAVMDLLNFMYSNTLSRTTSAAVLDVLMAADKFEVMSCIRYCSRMLGLMPMTCESALLYLDLPSNILTLDAIQPLVDTAKLFLATHYRDITKFADELLNLPLAGIEAVLSSDDLQMPSEDVVFEFVLKWARIHYPKIEDRKDVLEARLGRLIRFPYMSSRKLKKVLTCNDFHPDFASNVVLEALFYKAETPYRQRSLAAQDAGTTYSRLVERAYKLRHVKVVEFALPRPRCVVYLDLKKEECAQFFPNARIYSQAFPLGEQWFFLSARCNMDQQNASHCFGLFLAVQFKGSVSLHVDYEFAARSKSTEEYISRCKGDYTFTAGKAVGYRNLFGIPWTAFIADDSHFFIKGLLHLRAELTIRQ 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00176 520 Gene3D Potassium Channel Kv1.1; Chain A 111 225 IPR011333 -
Gma11g00176 520 SMART BTB_4 89 208 IPR000210 GO:0005515
Gma11g00176 520 Pfam BTB/POZ domain 118 204 IPR000210 GO:0005515
Gma11g00176 520 Gene3D - 240 346 - -
Gma11g00176 520 SUPERFAMILY POZ domain 118 204 IPR011333 -
Gma11g00176 520 SMART BACK_2 221 325 IPR011705 -
Gma11g00176 520 Pfam BTB And C-terminal Kelch 233 324 IPR011705 -
Gma11g00176 520 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN POB1 7 520 - -
Gma11g00176 520 CDD BTB_POZ_ZBTB_KLHL-like 117 191 - -
Gma11g00176 520 ProSiteProfiles BTB domain profile. 102 177 IPR000210 GO:0005515
Gma11g00176 520 PANTHER OS02G0260700 PROTEIN 7 520 IPR045890 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00176 Gma-Chr11 1374477 1378777 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00176 - - gmx:100780975 1026.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00176 11 1374477 1378777 Gma11g00176 11 1374477 1378777 ECH
Gma01g02239 01 57579881 57581260 Gma11g00176 11 1374477 1378777 GST