Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02223 ATGATGGAATCCCTTTGGAAACTGTTGTACTTGCTAGAGCCTGCGCCTGTCACACTTATCATTACAGCTGTGGCTGTGACATTTGGCGCAGCATTTCGAGCTCTAAACTATGGGAAAGAAATGGAGCATAATCGTGACTTATGTGAAGCATCGATTACATTGGATAGGTCACAGGCATTGATGATCCCGGTGATGAGCTCTTTTAGCTTGCTTTTGATGTTCTACTTGTTCTCATCTGTCTCGCAGCTTCTCACTGCATTCACTGCTGTTGCTTCCGCATCCTCTCTTTTCTTCTGCTTGTCTCCTTATGTTGCCTATTTGAAGGCACAGTTTGGTTTAGCGGATCCATTTGTTTCACGCTGTTGCTCGAAATCTTTTACACGACTCCAAGCAATACTATTGTTAGTGTGCTCTTTCACTGTGGCTGCTTGGCTTGTTTCTGGTCATTGGATACTGAACAATTTGTTAGGCATATCTATATGCATCGCGTTTGTAAGCCATGTGCGTCTTCCAAACATCAAAATTTGCGCTATGCTCCTTGTTTGTCTATTCGTGTATGACATTTTTTGGGTTTTCTTCTCTGAAAGATTTTTTGGTGCAAATGTCATGGTATCAGTGGCAACACAGCAAGCATCAAATCCTGTGCACACCGTTGCCAATAGTATCGGTCTTCCTGGGTTGCAACTGATAACTAAGAAATTAGAGCTGCCTGTAAAGATTGTTTTTCCAAGAAATTTGTTGGGTGGTGTTGTTCCTGGAGAGAATGCGGCAGACTTCATGATGCTTGGTTTAGGAGACATGGCTATCCCAGGCATGCTACTGGCTTTAGTCCTCTGCTTTGATTATCGCAAGAGCAGGGATACAGTAAATCTCTTAGAATTACATTCCTCAAAGGGGCACAAATACATATGGTATGCGCTACCCGGGTATGCCATTGGCCTGGTAACTGCTTTGGCAGCTGGTGTCTTGACCCACTCACCTCAACCTGCACTTCTTTATCTGGTGCCTTCTACTTTGGGACCTGTAGTTGTGATATCTTGGATGAAAAGGGAGCTATTTGAGTTGTGGGAAGGAAACACCCCAAATCTCAATGATAAAGATCGCGAAATAGAAGTTTAG 1119 0.4352 MMESLWKLLYLLEPAPVTLIITAVAVTFGAAFRALNYGKEMEHNRDLCEASITLDRSQALMIPVMSSFSLLLMFYLFSSVSQLLTAFTAVASASSLFFCLSPYVAYLKAQFGLADPFVSRCCSKSFTRLQAILLLVCSFTVAAWLVSGHWILNNLLGISICIAFVSHVRLPNIKICAMLLVCLFVYDIFWVFFSERFFGANVMVSVATQQASNPVHTVANSIGLPGLQLITKKLELPVKIVFPRNLLGGVVPGENAADFMMLGLGDMAIPGMLLALVLCFDYRKSRDTVNLLELHSSKGHKYIWYALPGYAIGLVTALAAGVLTHSPQPALLYLVPSTLGPVVVISWMKRELFELWEGNTPNLNDKDREIEV 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02223 372 Pfam Signal peptide peptidase 52 359 IPR007369 GO:0004190|GO:0016021
Gma10g02223 372 PANTHER SIGNAL PEPTIDE PEPTIDASE 5 359 IPR007369 GO:0004190|GO:0016021
Gma10g02223 372 SMART psh_8 50 349 IPR006639 GO:0004190|GO:0016021
Gma10g02223 372 PANTHER SIGNAL PEPTIDE PEPTIDASE-LIKE 3 5 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02223 Gma-Chr10 49772857 49776986 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02223 K09598 - gmx:100786631 731.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02223 10 49772857 49776986 Gma10g02223 10 49772857 49776986 ECH
Gma10g02223 10 49772857 49776986 Gma20g01497 20 42090396 42094383 GST