Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02218 ATGTCAATTCTGTGTGGTGTGCCTCTTCTTGAATGTGTGTACTGTCTGGCTTGTGCTCGTTGGGCTTGGAAAAGATGTATTTACACTGCAGGCCATGACAGTGAAACTTGGGGACTTGCCACTGTAGAAGAATTTGAGCCTGTTCCCCGCCTTTGTCGGTATATTTTAGCCGTGTATGAAGATGATATTCGACACCCTCTTTGGGAACCTCCTGGTGGCTATGGAATTATCCCTGATTGGTTAATACTCAAGAAGGCATATGAAGATACACAAGGAAGGGCCCCGCCCTATATGCTGTATCTTGATCATGATCATGCTGATATAGTTCTTGCCATTAGGGGACTAAATTTGGCAAAGGAGAGTGACTATGCAGTGTTGTTGGATAATAGATTGGGGAAGAGGAAGTTTGATGGGGGGTATGTTCACAACGGGCTGTTGAAGGCTGCTGGATGGGTTATGGATGCTGAATGTGAAATTCTAAAGGAGTTGGTAGAGAAGTATCCAAACTATTCTCTGACTTTTACTGGACATTCCCTTGGATCAGGAGTAGCAGCAATGTTGAGCATGGTAGTGGTGCAAAATCACGATAAACTTGGACATATTGAGAGGAAGAGGGTCAGGTGCTATGCTATTGCACCTGCTAGGTGTATGTCACTGAATTTGGCGGTCAGATATGCAGATGTCATCAACTCTGTTGTGCTTCAGGCAAGTTATATGAATCCTTTTGATGACTTCTTACCAAGGACAGCCACTCCATTGGAGGATATATTCAAATCTCTTTTCTGTTTGCCATGCTTATTGTGCTTGAGGTGCATGAAGGATACATGCATACCAGAGGAGAAGATGCTGAAAGATCCAAGGAGACTCTATGCTCCCGGTCGCCTTTATCACATTGTTGAGAGAAAGCCTTTCAGAATGGGAAGGTTTCCCCCAGTTGTGAGGACAGCAGTGCCAGTAGATGGAAGGTTTGAACACATAGTGCTTTCTTGCAATGCCACATCTGATCATGCCATTATTTGGATAGAGAAAGAAGCCCAAAGGGCTTTAGATTTGATGAGGGAGAAAGATAGTATCATGGAAATACCTGCAAATCAAATCATGGAGATGCAAGAAACATTAGCTAGACACAGTGAAGAATACAAAGCAGCATTACAAAGGGCTAAAACATTTGATGTTCCACATGCTTATACACCAGAATCACAATATGGAACTTTTGATGAGGAGGGAGAGGAGAGTTCAAGAAGGTCACAAGGTGAATCTTCTTTTGGTTCAACTAATAGGAGTACAGTGGATGAAACTTGGGATGAAATGATCGAGCGTCTTTTTGATAAGGATGAGCATGGTCACATTTTGCTCATGAAATAA 1365 0.4286 MSILCGVPLLECVYCLACARWAWKRCIYTAGHDSETWGLATVEEFEPVPRLCRYILAVYEDDIRHPLWEPPGGYGIIPDWLILKKAYEDTQGRAPPYMLYLDHDHADIVLAIRGLNLAKESDYAVLLDNRLGKRKFDGGYVHNGLLKAAGWVMDAECEILKELVEKYPNYSLTFTGHSLGSGVAAMLSMVVVQNHDKLGHIERKRVRCYAIAPARCMSLNLAVRYADVINSVVLQASYMNPFDDFLPRTATPLEDIFKSLFCLPCLLCLRCMKDTCIPEEKMLKDPRRLYAPGRLYHIVERKPFRMGRFPPVVRTAVPVDGRFEHIVLSCNATSDHAIIWIEKEAQRALDLMREKDSIMEIPANQIMEMQETLARHSEEYKAALQRAKTFDVPHAYTPESQYGTFDEEGEESSRRSQGESSFGSTNRSTVDETWDEMIERLFDKDEHGHILLMK 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02218 454 SUPERFAMILY alpha/beta-Hydrolases 41 277 IPR029058 -
Gma10g02218 454 MobiDBLite consensus disorder prediction 396 429 - -
Gma10g02218 454 Pfam Lipase 3 N-terminal region 9 74 IPR005592 GO:0016042
Gma10g02218 454 CDD Lipase_3 44 248 - -
Gma10g02218 454 Gene3D alpha/beta hydrolase 39 250 IPR029058 -
Gma10g02218 454 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 453 - -
Gma10g02218 454 Coils Coil 366 386 - -
Gma10g02218 454 Pfam Lipase (class 3) 109 238 IPR002921 GO:0006629
Gma10g02218 454 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02218 Gma-Chr10 49731959 49735419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02218 1 454 Miscellaneous Gene Families AT3G49050 70.124 0.0 684
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02218 - - gmx:100800742 894.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02218 10 49731959 49735419 Gma10g02218 10 49731959 49735419 ECH