Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02208 ATGGCACTGGCTTCTGTTCCAAAAGTGGTGTTTGGTTTAATTGCATTTGCAATCTTTTGGGTGCTAGCAGTTTTCCCAGCTATTCCATTTCTACCTATTGGGAGAACTGCAGGGTCCCTTCTTGGTGCCATGCTTATGGTCATATTCCAAGTTATTACTCCAGATGAAGCTTATGACACAATTGATCTTCCAATTCTTGGTCTTCTTTTTGGGACAATGGTTGTGAGTACTTATCTTGAAAGAGCAGACATGTTTAAGTATATAGGGAAGTTGCTGGCTTGGAAAAGTAGAGGTGCAAAGGACTTGCTTTGTAGGATTTGTGTTATCTCTGCTATCTCAAGTGCTCTTTTCACAAATGACACATCTTGTGTTGTTTTAACTGAATTCATATTGAAGATTGCAAGGCAGCATAACCTCCCTCCAACACCCTTCCTACTTGCCCTTGCTTCAAGTGCTAATATTGGATCCTCAGCAACTCCAATTGGCAACCCTCAAAACCTGGTTATAGCTGTTCAGAGTAAGATATCATTTGGGAATTTTCTGATTGGTATTCTTCCTGCTATGGTGGCAGGAGTTGTAGCAAATGCTATAATTCTCCTAATAATGTTTTGGAAGTTGTTATCTGTTCATAAGGATGAAGAAGATGCAGGTGCAGAAGATGTGGTAGAGGAGTATGATTCCCATCGGTTTTCTCCGGCCACAATGTCTCATTATTCATCCTTGAATTCTCAAGAATGGAGTTCCCATCTTGATGCTATTACTGTTCAGAACTCTCCTCAGGTTCAGATTCTAAGAAACCGGTCAATTGCAAATGCAAGTGAAAGTAATGGGATTTCTAGCAACACTTTTGATACTGCAAGAATCTCAAGTGTATCAAGGGATGGAACAAATGGTGTGGCATCTATGGCAAAGGAGGAAACTAGCCCTTCAAATTCGTCAGCAGGAGTAGATACACTTATTCCCCCTTCAGAAAGAAAAACCAATTTTATCATAAAATGGAAAAGGGTACTGTGGAAATCTTGTGTTTACATCATCACAGTTGGAATGCTGGTTGCTTTACTTCTAGGTTTAAATATGTCATGGACTGCAATTACTGCTGCACTTGCTCTCATAGTTCTTGATTTCAAAGATGCTACACCATGTTTAGAGAAGGTTTCGTATTCACTTTTGATATTCTTTTGTGGAATGTTTATTACAGTGGATGGCCTCAATAAAACTGGAATTCCAAGTGCTCTGTGGGACATAATGGAGCCCTATTCTCATGTTGATCGTGCTAGTGGAATTGCAATACTTGCAATTGTCATACTTGTCCTATCAAATTTGGCTTCAAATGTACCAACAGTTCTCTTGCTTGGAGGAAGGGTAGCAGCCTCAGCTGCTGCAATTTCCAAAGCAGATGAGAAGAAGGCATGGCTGATATTGGCTTGGGCCAGCACCATATCAGGGAATCTCTCATTGTTGGGATCAGCTGCTAACTTGATAGTGTGTGAACAGGCGATCCGTGCGCCAAACCTACCATACACATTAACCTTCTGGAGTCACCTGAAATTTGGCCTTCCTTCCACAATCATAGTCACTGCTATTGGTTTGACATTCATAAGATGA 1605 0.4081 MALASVPKVVFGLIAFAIFWVLAVFPAIPFLPIGRTAGSLLGAMLMVIFQVITPDEAYDTIDLPILGLLFGTMVVSTYLERADMFKYIGKLLAWKSRGAKDLLCRICVISAISSALFTNDTSCVVLTEFILKIARQHNLPPTPFLLALASSANIGSSATPIGNPQNLVIAVQSKISFGNFLIGILPAMVAGVVANAIILLIMFWKLLSVHKDEEDAGAEDVVEEYDSHRFSPATMSHYSSLNSQEWSSHLDAITVQNSPQVQILRNRSIANASESNGISSNTFDTARISSVSRDGTNGVASMAKEETSPSNSSAGVDTLIPPSERKTNFIIKWKRVLWKSCVYIITVGMLVALLLGLNMSWTAITAALALIVLDFKDATPCLEKVSYSLLIFFCGMFITVDGLNKTGIPSALWDIMEPYSHVDRASGIAILAIVILVLSNLASNVPTVLLLGGRVAASAAAISKADEKKAWLILAWASTISGNLSLLGSAANLIVCEQAIRAPNLPYTLTFWSHLKFGLPSTIIVTAIGLTFIR 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02208 534 CDD YbiR_permease 28 533 - -
Gma10g02208 534 PRINTS Arsenical pump membrane protein signature 109 133 IPR000802 GO:0015105|GO:0015700|GO:0016021
Gma10g02208 534 PRINTS Arsenical pump membrane protein signature 182 205 IPR000802 GO:0015105|GO:0015700|GO:0016021
Gma10g02208 534 MobiDBLite consensus disorder prediction 294 317 - -
Gma10g02208 534 PANTHER TRANSPORTER ARSB-RELATED 1 534 - -
Gma10g02208 534 Pfam Citrate transporter 27 480 IPR004680 GO:0016021|GO:0055085
Gma10g02208 534 PANTHER TRANSPORTER ARSB-RELATED 1 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02208 Gma-Chr10 49654560 49658499 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02208 - - gmx:100781849 986.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02208 10 49654560 49658499 Gma10g02208 10 49654560 49658499 ECH
Gma16g01558 16 35984467 35986991 Gma10g02208 10 49654560 49658499 PCT
Gma09g01292 09 35114840 35140006 Gma10g02208 10 49654560 49658499 PCT
Gma10g02208 10 49654560 49658499 Gma16g01557 16 35969601 35977545 PCT
Gma10g02208 10 49654560 49658499 Gma09g01291 09 35068945 35071723 PCT