Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02200 ATGAGGAGCCACACATTCCTTAGGATAACTTCACTTTTGGTGTTTATTGGGTGGCTCACGGTTTGGATCTTGTTGCCTACAAAGGTTTACAAGAACACCTGGACCCCCAAACTCAAAACCAAGTTAAACTCTACATACTTTAGAGAGCAAGGAACAAATCTCTTGCTTTTCACATTCCCCGTTATGCTCATAGGGGCCCTGAGCTGCATCTATCTCCATCTTCACGAAAAAGGAACGGAAAAGCTACCTTCCAAAAGCGGAGGAGTTGTAAACAGATGGTTATGTTTCTTGAGACGTCCATTTCTTGTGATGTCTCCAATAGGAATTGTCACATCTATGGAGATTATTTTTGCACTCATGTTTGTCGCACTCTTGATATGGTCCCTTTCCAATTACTTACATACCAGCTTTGGACACCTCCATATGCACAAGGAGGGCGAGAAAGTGTGGCAAGCAAAGTTCAGGAGTGTATCCCTGAGACTTGGGTACATAGGAAACATATGTTGGGCATTTCTATTCTTTCCAGTGACAAGAGGATCCTCTATTCTTCCCCTTGTTGGACTCACATCTGAGTCAAGCATCAAGTACCATATCTGGCTTGGACATCTATCCAATGTTCTCTTTGCTGCGCATACTGTAGGTTTCTTCATCTATTGGGGCATCACACACCAAATGAAAGAGACACTAGAGTGGAGCAAGACATATGTATCAAATGTAGCTGGGGTGATTGCAATTTTAATTGCATTAGTGATGTGGGTGACCAGCTTTCCAGGGTTCAGGCGAAAAATGTATGAGGTTTTCTTCTACACTCACCATCTCTACACTCTCTACATCTTATTTTATGCCATGCACGTCGGCGTTGAATGGATGTGCATGATTTCTCCGGGGATTTTCCTTTTTCTCATTGATAGACACCTTAGATTCTTACAATCTCGCCAATGTGCTCCGTTGCTATCAGCTCGCCTTTTACCTTGTGGTGCACTTGAACTCAACTTCTCCAAGAATCCAAGTTTATACTATAACCCCACGAGCATGGTGTTTATAAATGTGCCCAAGATTTCCAAGCTGCAGTGGCACCCTTTTACAGTCATTTCAAGTTGTAACATGGAAACAGATATTCTGAGTGTTGCCGTTAAAACTGGGGGTAGCTGGTCAAACAAACTTTATCAGGAACTTTCCTCATCTGCTTTGGATCATCTCAACGTTTCTGTTGAAGGACCCTATGGACCAACTACGACTTCACAATTTTTAAGGTACAAGCAGCTTGTGTTGGTGAGTGGTGGAAGTGGCATCACTCCCTTCATATCCATAATCCGGGATCTCATATTTCAAAACCGACAAGAACAAGAATCCCACGTTCCAAAAGTCCTACTTGTTTGTGCTTTCAAGAATTCTGCTGATCTAACCATGTTAGATCTTTTGCTTCCTCTTTTTGTTTCAACAACTCAATTCTCAAACCTTCATCAATTGCAAATCGAGGCCTATATTACCAGAGAAAAAGAAGAAGCCCCAAGAGATTCTCAAAAACAAATCCAAACCAAATGGTTTAAGCCTATCCTCTCAGACTCTCCTATCTCACTTGTATTAGGCCCAAACAACTGGCTATGGCTTGGTGCTATAATCTCGTCATCCTTTCTCATGTTCCTCCTCCTTTTGGGGATTATCACTCGTTACTACATATATCCAATTGAAAATAACTCAGATGAAGTTTATCATTGGACCTTTAAGGTTTTGTGGTTCATGTTTCTACTTTGTGCAGTCATATGCATATGTTCTAGTGCAGTTTTTCTTTGGTGGAAGAGACAAAACTCCTTGGAAAGTAAGCAAATCATGAATGTAGAATTTCCAACACCAACAAGGTCACCAGGGTCATGGATTTATGGCTCAGAGAGAGAACTAGAAAGTCTTCCCCACCAGTCTCTAGTGCAAGCAACCAATGTGCATTTTGGTGCAAGACCTGATCTCAAGAAAATTCTTTTTGAGTGCAAAGACAAAGACATTGGAGTCTTGGTTTCTGGGCCAAGGAGCATGAGACATGAAGTTGGCAAAATCTGTGCTTCCGGTCTAGCTGATAATCTTCACTTTGAATCATTCAGCTTTACATGGTGA 2109 0.4168 MRSHTFLRITSLLVFIGWLTVWILLPTKVYKNTWTPKLKTKLNSTYFREQGTNLLLFTFPVMLIGALSCIYLHLHEKGTEKLPSKSGGVVNRWLCFLRRPFLVMSPIGIVTSMEIIFALMFVALLIWSLSNYLHTSFGHLHMHKEGEKVWQAKFRSVSLRLGYIGNICWAFLFFPVTRGSSILPLVGLTSESSIKYHIWLGHLSNVLFAAHTVGFFIYWGITHQMKETLEWSKTYVSNVAGVIAILIALVMWVTSFPGFRRKMYEVFFYTHHLYTLYILFYAMHVGVEWMCMISPGIFLFLIDRHLRFLQSRQCAPLLSARLLPCGALELNFSKNPSLYYNPTSMVFINVPKISKLQWHPFTVISSCNMETDILSVAVKTGGSWSNKLYQELSSSALDHLNVSVEGPYGPTTTSQFLRYKQLVLVSGGSGITPFISIIRDLIFQNRQEQESHVPKVLLVCAFKNSADLTMLDLLLPLFVSTTQFSNLHQLQIEAYITREKEEAPRDSQKQIQTKWFKPILSDSPISLVLGPNNWLWLGAIISSSFLMFLLLLGIITRYYIYPIENNSDEVYHWTFKVLWFMFLLCAVICICSSAVFLWWKRQNSLESKQIMNVEFPTPTRSPGSWIYGSERELESLPHQSLVQATNVHFGARPDLKKILFECKDKDIGVLVSGPRSMRHEVGKICASGLADNLHFESFSFTW 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02200 702 PANTHER NADPH OXIDASE 6 701 - -
Gma10g02200 702 Pfam FAD-binding domain 317 411 IPR013112 GO:0016491
Gma10g02200 702 Pfam Ferric reductase like transmembrane component 162 280 IPR013130 -
Gma10g02200 702 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 402 499 IPR039261 -
Gma10g02200 702 CDD NOX_Duox_like_FAD_NADP 317 467 - -
Gma10g02200 702 SFLD Ferric Reductase Domain 26 702 - -
Gma10g02200 702 PANTHER FERRIC REDUCTION OXIDASE 4-RELATED 6 701 - -
Gma10g02200 702 SFLD Ferric reductase subgroup (FRE) 13 702 - -
Gma10g02200 702 PRINTS Cytochrome B-245 heavy chain signature 239 262 IPR000778 GO:0016020|GO:0016491
Gma10g02200 702 PRINTS Cytochrome B-245 heavy chain signature 264 284 IPR000778 GO:0016020|GO:0016491
Gma10g02200 702 PRINTS Cytochrome B-245 heavy chain signature 618 636 IPR000778 GO:0016020|GO:0016491
Gma10g02200 702 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 310 414 IPR017927 GO:0016491
Gma10g02200 702 Pfam Ferric reductase NAD binding domain 419 686 IPR013121 GO:0016491
Gma10g02200 702 Gene3D - 402 534 IPR039261 -
Gma10g02200 702 Gene3D - 609 702 IPR039261 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02200 Gma-Chr10 49565096 49570473 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02200 1 702 Miscellaneous Gene Families AT5G23980 58.110 0.0 829
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02200 K00521 - gmx:112998154 1419.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02200 10 49565096 49570473 Gma10g02200 10 49565096 49570473 ECH