Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02192 atgaagAAAGTTGTGTTGAAGGTGGAAATACATGATGACAAAATCAAGAAAAAAGCTATGAAGGCTGTCTCTGGCATTTTAGgggttgagttagtttctgcagacacgaaagacaagaaattgaccataattggggacattgatccaCTCTCAGAAACTTCAATAACAATGAAGaaagttgtgttgaaggtggaagtacatgaagacaaaatcaagcaaaaagctatgaaggttgtctctggcatttcaggggttgagtcagtttctgtggacatgaaagacaagaaattgaccATTTATTTTATTTTCTTTAAATATCATCAAACAGAGCTTCATTCAGTACACTACTTCAAAACAGTGACCTCCTTCACTTGGACTCTTGTTTGGCTTTTCTCAGCAACCGCGTCAATGAATaaagttgtgctaagtgtggaactacatgatgacaaaattaagaaaaaagccatgaaggtagtctccaatctttcaggggttgaatcagtctcagtggatatgaaagagcaaaaattgaccttaattggagacatcgaccctgtggttgcagtggggaagctgaggaagctgtgtcacactgacatagtctctgttggaccagccaaggaggagaataagggaaagaaTAATAAGGAGGAGAAAAAGAAGCCAGCAGTAGCAGAGAATCAAAATCATCAGAACTTGGATGATATGGTGAAGGCATACGAAGCCTACCACCACATGCATAATCAGATGAGGCAACCGGCttattattacataagtgtggaagagaatcctaatgcatgtgtcatttgctaa 813 0.1611 MKKVVLKVEIHDDKIKKKAMKAVSGILGVELVSADTKDKKLTIIGDIDPLSETSITMKKVVLKVEVHEDKIKQKAMKVVSGISGVESVSVDMKDKKLTIYFIFFKYHQTELHSVHYFKTVTSFTWTLVWLFSATASMNKVVLSVELHDDKIKKKAMKVVSNLSGVESVSVDMKEQKLTLIGDIDPVVAVGKLRKLCHTDIVSVGPAKEENKGKNNKEEKKKPAVAENQNHQNLDDMVKAYEAYHHMHNQMRQPAYYYISVEENPNACVIC 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02192 270 Gene3D - 1 55 - -
Gma10g02192 270 Gene3D - 57 100 - -
Gma10g02192 270 PANTHER ION-BINDING PROTEIN, PUTATIVE-RELATED 57 99 - -
Gma10g02192 270 PANTHER ION-BINDING PROTEIN, PUTATIVE-RELATED 137 270 - -
Gma10g02192 270 PANTHER ION-BINDING PROTEIN, PUTATIVE-RELATED 1 50 - -
Gma10g02192 270 Pfam Heavy-metal-associated domain 142 194 IPR006121 GO:0046872
Gma10g02192 270 MobiDBLite consensus disorder prediction 206 225 - -
Gma10g02192 270 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 137 270 - -
Gma10g02192 270 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 1 50 - -
Gma10g02192 270 Gene3D - 133 209 - -
Gma10g02192 270 SUPERFAMILY HMA, heavy metal-associated domain 137 196 IPR036163 GO:0046872
Gma10g02192 270 MobiDBLite consensus disorder prediction 206 228 - -
Gma10g02192 270 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 57 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02192 Gma-Chr10 49486557 49494291 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02192 - - gmx:100793345 248.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02192 10 49486557 49494291 Gma10g02192 10 49486557 49494291 ECH
Gma09g01244 09 34065836 34066434 Gma10g02192 10 49486557 49494291 PCT
Gma10g02192 10 49486557 49494291 Gma16g01536 16 35695349 35696948 PCT
Gma10g02192 10 49486557 49494291 Gma09g01242 09 34034722 34035684 PCT