Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02179 ATGGAAAACAACCTTAACCGTGAAACAGAAGGGCATGGCTTGCCTAAAATTCCATCACTAGTTCAACATATATCATCAAATGATGAAGGAAACTTTGACAATGGTGACTTGAAAAATCTAAGCTCATCTTTCAAAGAGAATGAAACAATCTTAGCAGGAAGCCAAGGTGATGAACATGCAGCCATTAATCATCGGAATAAGCATTCGGTATCTATCAACATACCATTCTCTTGTGAAGAGGTTCAGCTGCATAACACCGTAAGAGTTCTCTATAGTGGCGAAAATGATTTCTCTTCTCAATCAACTACTACAGACTCCAAGCCACCATTACCATCACAATCAATGCCAAATGGCAGTCTGCACTCAGAGCCAGCAAGCGGTGTCAATTTTAACAATCAAGAAAGCGTCATAAGCTTGAATAATAAGAGGATTGATTTTTTCAAAACATGGTCCAGTAAACTAGGGGGACACATATCAGTTATGAGTGGAAAGGTACATACAGAAAGTGCAGAAGATGATAACAGCTTATGCAACACTAATAAGCCTTTACCTGTTGATTTGTTCTTCAAAACATTGGAGGGTCCACAGTTACAAACTCCTAAGAAGTCTTCAGAAGAGATGGTGCTTCCTCAGGACAAGCAGTGGCCATTTCTTCTTCGGTTTCCGGTTTCATCTTTTGGTATTTGTCTTGGAGTTAGCAGTCAAGCAATTCTTTGGAAAGCATTGGCCACGTCTCCTTCCACTGCATTTCTTCACATAACCCCTAAAATAAATTTCATCCTATGGTTCATCTCCATTGCTATTGTTGCTACTATTTTCACCACCTATCTCTTCAAAATAATTCTCCATTTTGAAGCAGTTCGTCGTGAGTACCAACATCCGGTTCGTGTTAACTTCTTCTTTGCACCATGGATAGCCCTTTTGTTCCTAGCTCTTGGAGTTCCCCCATCAGTTACCAAGGACTTGCATCAAGCAGTTTGGTACATTCTAATGATTCCATTGTTCTGCCTTAAGCTAAAGATATATGGACAGTGGATGTTTGGGGGCAAAAGACTGCTGTCAAAGGTGGCCAATCCAACAAATCTCTTAGCAATTGTTGGAAATTTTGTAGGAGCCTTATTGGGTGCATCAATGGGCCTAAAAGAAGGGCCTCTTTTCTTCTTTGCTCTTGGGCTTGCTCACTACATGGTGTTGTTTGTAACTCTCTCCCAGATGCTTCCAACAAATAAGACCATCCCAAAAGACCTCCATCCAGTGTTCTTTCTTTTTGTGGCACCGCCTAGTGTTGCTGCTATGGCATGGGCTAAGATTCAGGGTTCATTTCATTATGAATCAAGGATTTTCTATTTCACTGCCATGTTCCTATATATTTCACTGGCTGTCCGGGTCAATCTTTTCAGAGGATTCAAATTCTCACTTTCATGGTGGGCCTACACTTTTCCAATGACTGCTGCAGCAATTGCTACCATAACCTATACAAATCAAGTCACAAATGTACTAACTCAAGCTTTGAGTGTAATATTGAGTCTCATTGCTACATTCACAGTAACAGCAGTGCTTGTCTCGACTATAGTGCATGCCTTTGTCCTACGAGACCTCTTTCCCAATGACCTTGCCATTGCCACAAGTGAGAGAAAGCAAAAACCACGCAGGAAATGGCTCCCATTTAAGACTTGGGAGCCATGA 1686 0.4122 MENNLNRETEGHGLPKIPSLVQHISSNDEGNFDNGDLKNLSSSFKENETILAGSQGDEHAAINHRNKHSVSINIPFSCEEVQLHNTVRVLYSGENDFSSQSTTTDSKPPLPSQSMPNGSLHSEPASGVNFNNQESVISLNNKRIDFFKTWSSKLGGHISVMSGKVHTESAEDDNSLCNTNKPLPVDLFFKTLEGPQLQTPKKSSEEMVLPQDKQWPFLLRFPVSSFGICLGVSSQAILWKALATSPSTAFLHITPKINFILWFISIAIVATIFTTYLFKIILHFEAVRREYQHPVRVNFFFAPWIALLFLALGVPPSVTKDLHQAVWYILMIPLFCLKLKIYGQWMFGGKRLLSKVANPTNLLAIVGNFVGALLGASMGLKEGPLFFFALGLAHYMVLFVTLSQMLPTNKTIPKDLHPVFFLFVAPPSVAAMAWAKIQGSFHYESRIFYFTAMFLYISLAVRVNLFRGFKFSLSWWAYTFPMTAAAIATITYTNQVTNVLTQALSVILSLIATFTVTAVLVSTIVHAFVLRDLFPNDLAIATSERKQKPRRKWLPFKTWEP 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02179 561 PANTHER - 9 550 IPR030183 GO:0006873|GO:0008308|GO:0016021
Gma10g02179 561 CDD TDT_SLAC1_like 220 523 - -
Gma10g02179 561 Pfam Voltage-dependent anion channel 221 524 IPR004695 GO:0016021|GO:0055085
Gma10g02179 561 Gene3D - 217 534 IPR038665 -
Gma10g02179 561 PANTHER S-TYPE ANION CHANNEL SLAH3 9 550 - -
Gma10g02179 561 MobiDBLite consensus disorder prediction 96 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02179 Gma-Chr10 49364140 49367885 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02179 - - gmx:100789128 1118.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02179 10 49364140 49367885 Gma10g02179 10 49364140 49367885 ECH
Gma16g01518 16 35048968 35053360 Gma10g02179 10 49364140 49367885 PCT
Gma09g01197 09 32662077 32665488 Gma10g02179 10 49364140 49367885 PCT
Gma10g02179 10 49364140 49367885 Gma16g01518 16 35048968 35053360 PCT
Gma10g02179 10 49364140 49367885 Gma09g01197 09 32662077 32665488 PCT