Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02175 GATATGGACATATGATACATCAACTCCAGTGTCTAGAAATGCAACCATATATTGTGGCACTGAAATTTTGTCACTTGACTGGGAATGTAAATCAGACCGCTTGCTTCTTATAGGTACATCCGATGGGTGCATTAAGGCATGGAATGTGGATGCAAAGAGAGTTGTCTGTGACCTCAACACAACCGAAGCATTTCCAAGTGTATTGGACATAAAGTGCAGTCCTGTGGAACCTATTTTTGTGTCTGCAGCAGCATCTGGAGGGGCTGGTTCTAACTATattgacaacctgggttttgcttcacttactgtgtggaacatgaagaCATGGAAAGCCATGGTATGTGCTTCTTTGTATAAAATGTTTTATGTTTATGTTGTTTTATGGCTATTTTTAATTTTGGATTTCATAAAGACAGTCCTTCCTCTTGGAGAAGATCCACCAGCAATTACTTCTCTATGCTTTAATCACAATGGAAAGATTTTGGCAGCTTCTGCCGTTGATGGAATGATTCACATGTTTGTCGAAGACATGTCTGCTGGTCTACAAATCACTGGCTGGCCAGCACATGATTCTTCCATCAGTTCTATTCTGTTTGGACCAGATGAGACTAGCATTTTTAGCCTGGGCTCTGATGGGAAGGCAAGTATTATAAATTTAATGTTATTTCAGCTTATTTTTGAGTGGAGTTTGCAAAATCAAGGTCAAATCCTACATGAGATGGCATTAGATGCAAATGGGAGGAGACTCTTGGTAACATCCAGTTCATTTAGAGCACCCATATACCAGGTTCATGGTCATTTGAGTGGATGGAGAACACTTCCGCACGGTGCTCCTATTACTGCTGTGGATTGGCATCCGACCCTGCCCATTTTCTTGACTGGATCAGCTGATAACTCTGTCCGAGTAACATCTTTATCATAG 922 0.3915 IWTYDTSTPVSRNATIYCGTEILSLDWECKSDRLLLIGTSDGCIKAWNVDAKRVVCDLNTTEAFPSVLDIKCSPVEPIFVSAAASGGAGSNYIDNLGFASLTVWNMKTWKAMVCASLYKMFYVYVVLWLFLILDFIKTVLPLGEDPPAITSLCFNHNGKILAASAVDGMIHMFVEDMSAGLQITGWPAHDSSISSILFGPDETSIFSLGSDGKASIINLMLFQLIFEWSLQNQGQILHEMALDANGRRLLVTSSSFRAPIYQVHGHLSGWRTLPHGAPITAVDWHPTLPIFLTGSADNSVRVTSLS 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02175 306 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 272 306 - -
Gma10g02175 306 ProSiteProfiles Trp-Asp (WD) repeats profile. 272 306 IPR001680 GO:0005515
Gma10g02175 306 SMART WD40_4 266 304 IPR001680 GO:0005515
Gma10g02175 306 SMART WD40_4 179 218 IPR001680 GO:0005515
Gma10g02175 306 SMART WD40_4 9 48 IPR001680 GO:0005515
Gma10g02175 306 SMART WD40_4 133 174 IPR001680 GO:0005515
Gma10g02175 306 Pfam WD domain, G-beta repeat 149 172 IPR001680 GO:0005515
Gma10g02175 306 Pfam WD domain, G-beta repeat 265 302 IPR001680 GO:0005515
Gma10g02175 306 Gene3D - 1 88 IPR015943 GO:0005515
Gma10g02175 306 PANTHER OS05G0299300 PROTEIN 1 305 - -
Gma10g02175 306 Gene3D - 100 306 IPR015943 GO:0005515
Gma10g02175 306 SUPERFAMILY WD40 repeat-like 4 302 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02175 Gma-Chr10 49298689 49329723 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02175 K24760 - gmx:100788591 504.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02175 10 49298689 49329723 Gma10g02175 10 49298689 49329723 ECH