Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02094 ATGCCAATGCTTCGTTGCTTCTTCAACAAAGCCTTTAAAGCCTCCAAATGTGCAACCTTGTTGCAACTCACAATTCCACGCATAAAGTTGCTGAGAAACAGAAGAGAGGTTCATCTGAAGCAGATGCGAAGAGACGTTGCTAAGCTACTTGAGGCTGGTCAAGAAGCCAAGGCTAGCCTTAAGGTGGAGCATGTTATGAGAGAGGAGAACATCATGGCTGCTCAAGACATCATTCAACTCTTTTGTGAACTTATTGCTGCACGCATTGCATTTGTTCAATCACAAAGGAAATGTCCCCTTGATTTGAAGGAAGCAATATCTAGTGTATGTTTTGCTGCACCAAGATGTGCGGATCTGCCAGAGTTATTGCAGGTTCAGTCGCTATTTGCTTCCAAATACGGAAAGGATTTTGTATCTGCAGCAACTGATCTCACCCCTGACTGCAGTGTTAATGGCCAGTTAATAGAGCTGTTGTCAGTTCAAGCACCTTCACAGGAAAAGAAACTGAAACTTCTAAAAGAAATTGCTGTTGAGCATAAGTTAGACTGGGATCCAACTGCCTCAGAAACCAAGTCCTTTAAAAAACATGAGGACTTACTGAATGACCCCATTCAATTTTGTAGTCAATGTGTGTCAAAATTGCCtcttcctgaagaaaaacacactgaagttgatcttcaatcatcaagccaatctgGATCACTTGGATCAGACAAACATAAACCTAATACTTCATTTGATAAAAAGGACAGTGAACAGTCTATGTCATTCATCTCAACTCCCCTTGATAATAAGCTTACCAAGAAAAATGGTGCACATGTGTCAGATAGCAGCTTTGAGAATCCATTCTTTGTAAGTGTTGGTAATAAATCTGAAACAGAAAGGGAACATTTCACTGAACAAAATGCTGCAAATGACTATGATGATGGTGGCATAAATAATGTGGAGTTTGAGCCTGCCTTCTCATTCTCTCATTCATCAAGTTTTCCTTCATTTGATATACCCAAGGAAGATTTTGGTTCTTCCCTACACAATCATTCTGTATTGGATGACAAATCCTCTCATCACCAGCTTAAGAGATTGCCTTCACTAGATGATTATTCGGGTTTCTCATACCCAAACTTATTCACCCCAAAAAACTCAAATAATTGGTCTCATACATTCAGATAA 1170 0.3803 MPMLRCFFNKAFKASKCATLLQLTIPRIKLLRNRREVHLKQMRRDVAKLLEAGQEAKASLKVEHVMREENIMAAQDIIQLFCELIAARIAFVQSQRKCPLDLKEAISSVCFAAPRCADLPELLQVQSLFASKYGKDFVSAATDLTPDCSVNGQLIELLSVQAPSQEKKLKLLKEIAVEHKLDWDPTASETKSFKKHEDLLNDPIQFCSQCVSKLPLPEEKHTEVDLQSSSQSGSLGSDKHKPNTSFDKKDSEQSMSFISTPLDNKLTKKNGAHVSDSSFENPFFVSVGNKSETEREHFTEQNAANDYDDGGINNVEFEPAFSFSHSSSFPSFDIPKEDFGSSLHNHSVLDDKSSHHQLKRLPSLDDYSGFSYPNLFTPKNSNNWSHTFR 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02094 389 MobiDBLite consensus disorder prediction 221 269 - -
Gma10g02094 389 Coils Coil 39 59 - -
Gma10g02094 389 MobiDBLite consensus disorder prediction 226 240 - -
Gma10g02094 389 Gene3D - 5 193 IPR042277 -
Gma10g02094 389 PANTHER REGULATOR OF VPS4 ACTIVITY IN THE MVB PATHWAY PROTEIN 265 387 - -
Gma10g02094 389 PANTHER REGULATOR OF VPS4 ACTIVITY IN THE MVB PATHWAY PROTEIN 1 256 - -
Gma10g02094 389 PANTHER IST1 FAMILY MEMBER 265 387 IPR005061 GO:0015031
Gma10g02094 389 PANTHER IST1 FAMILY MEMBER 1 256 IPR005061 GO:0015031
Gma10g02094 389 Pfam Regulator of Vps4 activity in the MVB pathway 19 181 IPR005061 GO:0015031
Gma10g02094 389 MobiDBLite consensus disorder prediction 249 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02094 Gma-Chr10 48471031 48473333 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02094 - - gmx:100816410 770.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02094 10 48471031 48473333 Gma10g02094 10 48471031 48473333 ECH